Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21645 | 65158;65159;65160 | chr2:178584708;178584707;178584706 | chr2:179449435;179449434;179449433 |
N2AB | 20004 | 60235;60236;60237 | chr2:178584708;178584707;178584706 | chr2:179449435;179449434;179449433 |
N2A | 19077 | 57454;57455;57456 | chr2:178584708;178584707;178584706 | chr2:179449435;179449434;179449433 |
N2B | 12580 | 37963;37964;37965 | chr2:178584708;178584707;178584706 | chr2:179449435;179449434;179449433 |
Novex-1 | 12705 | 38338;38339;38340 | chr2:178584708;178584707;178584706 | chr2:179449435;179449434;179449433 |
Novex-2 | 12772 | 38539;38540;38541 | chr2:178584708;178584707;178584706 | chr2:179449435;179449434;179449433 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.993 | N | 0.744 | 0.459 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
P/S | rs1553632774 | None | 0.987 | N | 0.682 | 0.402 | 0.324986149311 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/S | rs1553632774 | None | 0.987 | N | 0.682 | 0.402 | 0.324986149311 | gnomAD-4.0.0 | 2.03023E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.205E-06 | 0 | 3.40252E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1009 | likely_benign | 0.0943 | benign | -1.769 | Destabilizing | 0.117 | N | 0.432 | neutral | N | 0.476088818 | None | None | I |
P/C | 0.6294 | likely_pathogenic | 0.6077 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
P/D | 0.8951 | likely_pathogenic | 0.8806 | pathogenic | -1.917 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | I |
P/E | 0.8154 | likely_pathogenic | 0.7994 | pathogenic | -1.9 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/F | 0.6979 | likely_pathogenic | 0.6542 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
P/G | 0.4013 | ambiguous | 0.3669 | ambiguous | -2.096 | Highly Destabilizing | 0.966 | D | 0.656 | neutral | None | None | None | None | I |
P/H | 0.553 | ambiguous | 0.5198 | ambiguous | -1.583 | Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.531619805 | None | None | I |
P/I | 0.6839 | likely_pathogenic | 0.675 | pathogenic | -0.948 | Destabilizing | 0.995 | D | 0.789 | deleterious | None | None | None | None | I |
P/K | 0.9017 | likely_pathogenic | 0.8961 | pathogenic | -1.481 | Destabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | I |
P/L | 0.5455 | ambiguous | 0.5322 | ambiguous | -0.948 | Destabilizing | 0.993 | D | 0.744 | deleterious | N | 0.511234144 | None | None | I |
P/M | 0.6636 | likely_pathogenic | 0.6375 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
P/N | 0.7642 | likely_pathogenic | 0.7212 | pathogenic | -1.32 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | I |
P/Q | 0.674 | likely_pathogenic | 0.6451 | pathogenic | -1.508 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | I |
P/R | 0.8399 | likely_pathogenic | 0.8425 | pathogenic | -0.888 | Destabilizing | 0.997 | D | 0.746 | deleterious | N | 0.515464106 | None | None | I |
P/S | 0.2449 | likely_benign | 0.2095 | benign | -1.811 | Destabilizing | 0.987 | D | 0.682 | prob.neutral | N | 0.503347333 | None | None | I |
P/T | 0.3291 | likely_benign | 0.3045 | benign | -1.698 | Destabilizing | 0.993 | D | 0.705 | prob.neutral | D | 0.530859337 | None | None | I |
P/V | 0.4972 | ambiguous | 0.4905 | ambiguous | -1.19 | Destabilizing | 0.99 | D | 0.678 | prob.neutral | None | None | None | None | I |
P/W | 0.862 | likely_pathogenic | 0.8535 | pathogenic | -1.543 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
P/Y | 0.6723 | likely_pathogenic | 0.6324 | pathogenic | -1.276 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.