Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21646 | 65161;65162;65163 | chr2:178584705;178584704;178584703 | chr2:179449432;179449431;179449430 |
N2AB | 20005 | 60238;60239;60240 | chr2:178584705;178584704;178584703 | chr2:179449432;179449431;179449430 |
N2A | 19078 | 57457;57458;57459 | chr2:178584705;178584704;178584703 | chr2:179449432;179449431;179449430 |
N2B | 12581 | 37966;37967;37968 | chr2:178584705;178584704;178584703 | chr2:179449432;179449431;179449430 |
Novex-1 | 12706 | 38341;38342;38343 | chr2:178584705;178584704;178584703 | chr2:179449432;179449431;179449430 |
Novex-2 | 12773 | 38542;38543;38544 | chr2:178584705;178584704;178584703 | chr2:179449432;179449431;179449430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1203566511 | None | 0.933 | N | 0.609 | 0.321 | 0.591436515814 | gnomAD-4.0.0 | 1.59196E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85976E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3979 | ambiguous | 0.3795 | ambiguous | -2.529 | Highly Destabilizing | 0.841 | D | 0.587 | neutral | None | None | None | None | N |
L/C | 0.6017 | likely_pathogenic | 0.5886 | pathogenic | -1.65 | Destabilizing | 0.998 | D | 0.664 | prob.neutral | None | None | None | None | N |
L/D | 0.9448 | likely_pathogenic | 0.9523 | pathogenic | -3.142 | Highly Destabilizing | 0.991 | D | 0.839 | deleterious | None | None | None | None | N |
L/E | 0.6909 | likely_pathogenic | 0.7109 | pathogenic | -2.917 | Highly Destabilizing | 0.991 | D | 0.827 | deleterious | None | None | None | None | N |
L/F | 0.4245 | ambiguous | 0.4293 | ambiguous | -1.55 | Destabilizing | 0.933 | D | 0.609 | neutral | N | 0.518369348 | None | None | N |
L/G | 0.8072 | likely_pathogenic | 0.8135 | pathogenic | -3.044 | Highly Destabilizing | 0.991 | D | 0.773 | deleterious | None | None | None | None | N |
L/H | 0.6191 | likely_pathogenic | 0.6413 | pathogenic | -2.638 | Highly Destabilizing | 0.997 | D | 0.864 | deleterious | D | 0.531157685 | None | None | N |
L/I | 0.1095 | likely_benign | 0.1063 | benign | -1.032 | Destabilizing | 0.005 | N | 0.255 | neutral | N | 0.503235282 | None | None | N |
L/K | 0.6048 | likely_pathogenic | 0.6335 | pathogenic | -2.081 | Highly Destabilizing | 0.974 | D | 0.641 | neutral | None | None | None | None | N |
L/M | 0.158 | likely_benign | 0.1553 | benign | -0.909 | Destabilizing | 0.949 | D | 0.621 | neutral | None | None | None | None | N |
L/N | 0.7451 | likely_pathogenic | 0.7597 | pathogenic | -2.443 | Highly Destabilizing | 0.991 | D | 0.843 | deleterious | None | None | None | None | N |
L/P | 0.9766 | likely_pathogenic | 0.9839 | pathogenic | -1.514 | Destabilizing | 0.989 | D | 0.831 | deleterious | N | 0.489113051 | None | None | N |
L/Q | 0.3472 | ambiguous | 0.3594 | ambiguous | -2.302 | Highly Destabilizing | 0.991 | D | 0.741 | deleterious | None | None | None | None | N |
L/R | 0.5217 | ambiguous | 0.5484 | ambiguous | -1.768 | Destabilizing | 0.989 | D | 0.705 | prob.delet. | N | 0.51305343 | None | None | N |
L/S | 0.5571 | ambiguous | 0.5449 | ambiguous | -3.025 | Highly Destabilizing | 0.974 | D | 0.566 | neutral | None | None | None | None | N |
L/T | 0.3512 | ambiguous | 0.3299 | benign | -2.673 | Highly Destabilizing | 0.841 | D | 0.626 | neutral | None | None | None | None | N |
L/V | 0.1114 | likely_benign | 0.1108 | benign | -1.514 | Destabilizing | 0.051 | N | 0.278 | neutral | D | 0.529957737 | None | None | N |
L/W | 0.7655 | likely_pathogenic | 0.7866 | pathogenic | -2.054 | Highly Destabilizing | 0.998 | D | 0.786 | deleterious | None | None | None | None | N |
L/Y | 0.7045 | likely_pathogenic | 0.7227 | pathogenic | -1.736 | Destabilizing | 0.991 | D | 0.629 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.