Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21650 | 65173;65174;65175 | chr2:178584693;178584692;178584691 | chr2:179449420;179449419;179449418 |
N2AB | 20009 | 60250;60251;60252 | chr2:178584693;178584692;178584691 | chr2:179449420;179449419;179449418 |
N2A | 19082 | 57469;57470;57471 | chr2:178584693;178584692;178584691 | chr2:179449420;179449419;179449418 |
N2B | 12585 | 37978;37979;37980 | chr2:178584693;178584692;178584691 | chr2:179449420;179449419;179449418 |
Novex-1 | 12710 | 38353;38354;38355 | chr2:178584693;178584692;178584691 | chr2:179449420;179449419;179449418 |
Novex-2 | 12777 | 38554;38555;38556 | chr2:178584693;178584692;178584691 | chr2:179449420;179449419;179449418 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2048550217 | None | 0.991 | N | 0.554 | 0.239 | 0.251639045875 | gnomAD-4.0.0 | 1.59198E-06 | None | None | None | None | I | None | 5.66508E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2596 | likely_benign | 0.2612 | benign | -0.139 | Destabilizing | 0.997 | D | 0.61 | neutral | None | None | None | None | I |
K/C | 0.6227 | likely_pathogenic | 0.5933 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
K/D | 0.5813 | likely_pathogenic | 0.5953 | pathogenic | -0.028 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | I |
K/E | 0.1643 | likely_benign | 0.171 | benign | 0.038 | Stabilizing | 0.991 | D | 0.554 | neutral | N | 0.391991998 | None | None | I |
K/F | 0.7808 | likely_pathogenic | 0.7829 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
K/G | 0.3962 | ambiguous | 0.4065 | ambiguous | -0.418 | Destabilizing | 0.999 | D | 0.61 | neutral | None | None | None | None | I |
K/H | 0.3292 | likely_benign | 0.3348 | benign | -0.593 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
K/I | 0.3665 | ambiguous | 0.3813 | ambiguous | 0.546 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
K/L | 0.3429 | ambiguous | 0.3496 | ambiguous | 0.546 | Stabilizing | 0.999 | D | 0.61 | neutral | None | None | None | None | I |
K/M | 0.2542 | likely_benign | 0.2695 | benign | 0.113 | Stabilizing | 1.0 | D | 0.759 | deleterious | N | 0.453195172 | None | None | I |
K/N | 0.4399 | ambiguous | 0.4561 | ambiguous | -0.154 | Destabilizing | 0.999 | D | 0.753 | deleterious | N | 0.411713909 | None | None | I |
K/P | 0.339 | likely_benign | 0.3315 | benign | 0.348 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
K/Q | 0.1306 | likely_benign | 0.1334 | benign | -0.21 | Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.430126312 | None | None | I |
K/R | 0.073 | likely_benign | 0.0726 | benign | -0.259 | Destabilizing | 0.451 | N | 0.329 | neutral | N | 0.408038886 | None | None | I |
K/S | 0.3608 | ambiguous | 0.3702 | ambiguous | -0.64 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | None | None | None | None | I |
K/T | 0.1774 | likely_benign | 0.1863 | benign | -0.398 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.40844153 | None | None | I |
K/V | 0.2813 | likely_benign | 0.2918 | benign | 0.348 | Stabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | I |
K/W | 0.7986 | likely_pathogenic | 0.8024 | pathogenic | -0.048 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
K/Y | 0.6251 | likely_pathogenic | 0.6321 | pathogenic | 0.267 | Stabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.