Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21652 | 65179;65180;65181 | chr2:178584687;178584686;178584685 | chr2:179449414;179449413;179449412 |
N2AB | 20011 | 60256;60257;60258 | chr2:178584687;178584686;178584685 | chr2:179449414;179449413;179449412 |
N2A | 19084 | 57475;57476;57477 | chr2:178584687;178584686;178584685 | chr2:179449414;179449413;179449412 |
N2B | 12587 | 37984;37985;37986 | chr2:178584687;178584686;178584685 | chr2:179449414;179449413;179449412 |
Novex-1 | 12712 | 38359;38360;38361 | chr2:178584687;178584686;178584685 | chr2:179449414;179449413;179449412 |
Novex-2 | 12779 | 38560;38561;38562 | chr2:178584687;178584686;178584685 | chr2:179449414;179449413;179449412 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1386324100 | None | 0.025 | N | 0.409 | 0.237 | 0.532359089423 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1483 | likely_benign | 0.1669 | benign | -0.988 | Destabilizing | 0.025 | N | 0.409 | neutral | N | 0.4776553 | None | None | N |
V/C | 0.6479 | likely_pathogenic | 0.629 | pathogenic | -0.712 | Destabilizing | 0.869 | D | 0.533 | neutral | None | None | None | None | N |
V/D | 0.3848 | ambiguous | 0.456 | ambiguous | -0.69 | Destabilizing | 0.303 | N | 0.729 | deleterious | N | 0.478415768 | None | None | N |
V/E | 0.2476 | likely_benign | 0.2596 | benign | -0.761 | Destabilizing | 0.366 | N | 0.621 | neutral | None | None | None | None | N |
V/F | 0.1594 | likely_benign | 0.1736 | benign | -0.917 | Destabilizing | 0.097 | N | 0.561 | neutral | N | 0.478162279 | None | None | N |
V/G | 0.2845 | likely_benign | 0.3331 | benign | -1.216 | Destabilizing | 0.303 | N | 0.696 | prob.delet. | N | 0.479176237 | None | None | N |
V/H | 0.4094 | ambiguous | 0.4265 | ambiguous | -0.688 | Destabilizing | 0.869 | D | 0.722 | deleterious | None | None | None | None | N |
V/I | 0.0685 | likely_benign | 0.0678 | benign | -0.506 | Destabilizing | None | N | 0.095 | neutral | N | 0.493406999 | None | None | N |
V/K | 0.1805 | likely_benign | 0.1949 | benign | -0.824 | Destabilizing | 0.366 | N | 0.625 | neutral | None | None | None | None | N |
V/L | 0.1149 | likely_benign | 0.1134 | benign | -0.506 | Destabilizing | None | N | 0.121 | neutral | N | 0.465792015 | None | None | N |
V/M | 0.1119 | likely_benign | 0.1132 | benign | -0.383 | Destabilizing | 0.125 | N | 0.517 | neutral | None | None | None | None | N |
V/N | 0.254 | likely_benign | 0.2893 | benign | -0.526 | Destabilizing | 0.637 | D | 0.736 | deleterious | None | None | None | None | N |
V/P | 0.4682 | ambiguous | 0.5454 | ambiguous | -0.63 | Destabilizing | 0.637 | D | 0.659 | prob.neutral | None | None | None | None | N |
V/Q | 0.2213 | likely_benign | 0.2249 | benign | -0.767 | Destabilizing | 0.637 | D | 0.665 | prob.neutral | None | None | None | None | N |
V/R | 0.1592 | likely_benign | 0.1762 | benign | -0.236 | Destabilizing | 0.366 | N | 0.74 | deleterious | None | None | None | None | N |
V/S | 0.2153 | likely_benign | 0.2546 | benign | -0.981 | Destabilizing | 0.141 | N | 0.572 | neutral | None | None | None | None | N |
V/T | 0.1142 | likely_benign | 0.1237 | benign | -0.947 | Destabilizing | 0.075 | N | 0.465 | neutral | None | None | None | None | N |
V/W | 0.6861 | likely_pathogenic | 0.6959 | pathogenic | -1.012 | Destabilizing | 0.869 | D | 0.751 | deleterious | None | None | None | None | N |
V/Y | 0.4465 | ambiguous | 0.453 | ambiguous | -0.737 | Destabilizing | 0.366 | N | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.