Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21662 | 65209;65210;65211 | chr2:178584567;178584566;178584565 | chr2:179449294;179449293;179449292 |
N2AB | 20021 | 60286;60287;60288 | chr2:178584567;178584566;178584565 | chr2:179449294;179449293;179449292 |
N2A | 19094 | 57505;57506;57507 | chr2:178584567;178584566;178584565 | chr2:179449294;179449293;179449292 |
N2B | 12597 | 38014;38015;38016 | chr2:178584567;178584566;178584565 | chr2:179449294;179449293;179449292 |
Novex-1 | 12722 | 38389;38390;38391 | chr2:178584567;178584566;178584565 | chr2:179449294;179449293;179449292 |
Novex-2 | 12789 | 38590;38591;38592 | chr2:178584567;178584566;178584565 | chr2:179449294;179449293;179449292 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1368089730 | -1.275 | 0.979 | N | 0.628 | 0.308 | 0.260735089382 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.82E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1368089730 | -1.275 | 0.979 | N | 0.628 | 0.308 | 0.260735089382 | gnomAD-4.0.0 | 3.19107E-06 | None | None | None | None | N | None | 0 | 4.58253E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | None | None | 0.919 | N | 0.735 | 0.321 | 0.364342057095 | gnomAD-4.0.0 | 1.59544E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43616E-05 | 0 |
E/K | rs2048514000 | None | 0.958 | N | 0.626 | 0.351 | 0.284150004643 | gnomAD-4.0.0 | 3.42543E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.01235E-04 | None | 0 | 0 | 9.00387E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.108 | likely_benign | 0.1028 | benign | -0.743 | Destabilizing | 0.067 | N | 0.439 | neutral | N | 0.426333858 | None | None | N |
E/C | 0.778 | likely_pathogenic | 0.7664 | pathogenic | -0.44 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
E/D | 0.4377 | ambiguous | 0.4199 | ambiguous | -1.227 | Destabilizing | 0.979 | D | 0.628 | neutral | N | 0.484308479 | None | None | N |
E/F | 0.8425 | likely_pathogenic | 0.8422 | pathogenic | -0.653 | Destabilizing | 0.995 | D | 0.855 | deleterious | None | None | None | None | N |
E/G | 0.2763 | likely_benign | 0.2588 | benign | -1.07 | Destabilizing | 0.919 | D | 0.735 | prob.delet. | N | 0.484308479 | None | None | N |
E/H | 0.6742 | likely_pathogenic | 0.6728 | pathogenic | -1.084 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/I | 0.3786 | ambiguous | 0.4084 | ambiguous | 0.133 | Stabilizing | 0.991 | D | 0.839 | deleterious | None | None | None | None | N |
E/K | 0.2185 | likely_benign | 0.2322 | benign | -0.737 | Destabilizing | 0.958 | D | 0.626 | neutral | N | 0.509667317 | None | None | N |
E/L | 0.5233 | ambiguous | 0.5352 | ambiguous | 0.133 | Stabilizing | 0.982 | D | 0.783 | deleterious | None | None | None | None | N |
E/M | 0.4792 | ambiguous | 0.4806 | ambiguous | 0.624 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/N | 0.5457 | ambiguous | 0.5473 | ambiguous | -1.005 | Destabilizing | 0.995 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/P | 0.2775 | likely_benign | 0.2701 | benign | -0.137 | Destabilizing | 0.995 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/Q | 0.1405 | likely_benign | 0.142 | benign | -0.908 | Destabilizing | 0.994 | D | 0.706 | prob.neutral | N | 0.497874243 | None | None | N |
E/R | 0.351 | ambiguous | 0.3556 | ambiguous | -0.646 | Destabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/S | 0.2555 | likely_benign | 0.247 | benign | -1.324 | Destabilizing | 0.938 | D | 0.623 | neutral | None | None | None | None | N |
E/T | 0.3031 | likely_benign | 0.3107 | benign | -1.059 | Destabilizing | 0.991 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/V | 0.2087 | likely_benign | 0.2263 | benign | -0.137 | Destabilizing | 0.976 | D | 0.753 | deleterious | N | 0.498298318 | None | None | N |
E/W | 0.9659 | likely_pathogenic | 0.9625 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
E/Y | 0.7638 | likely_pathogenic | 0.7644 | pathogenic | -0.456 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.