Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21668 | 65227;65228;65229 | chr2:178584549;178584548;178584547 | chr2:179449276;179449275;179449274 |
N2AB | 20027 | 60304;60305;60306 | chr2:178584549;178584548;178584547 | chr2:179449276;179449275;179449274 |
N2A | 19100 | 57523;57524;57525 | chr2:178584549;178584548;178584547 | chr2:179449276;179449275;179449274 |
N2B | 12603 | 38032;38033;38034 | chr2:178584549;178584548;178584547 | chr2:179449276;179449275;179449274 |
Novex-1 | 12728 | 38407;38408;38409 | chr2:178584549;178584548;178584547 | chr2:179449276;179449275;179449274 |
Novex-2 | 12795 | 38608;38609;38610 | chr2:178584549;178584548;178584547 | chr2:179449276;179449275;179449274 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.437 | N | 0.396 | 0.201 | 0.342400092842 | gnomAD-4.0.0 | 1.59437E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78645E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5498 | ambiguous | 0.5133 | ambiguous | -1.483 | Destabilizing | 0.78 | D | 0.537 | neutral | N | 0.505379006 | None | None | N |
V/C | 0.8603 | likely_pathogenic | 0.8504 | pathogenic | -1.151 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/D | 0.9536 | likely_pathogenic | 0.9407 | pathogenic | -1.259 | Destabilizing | 0.995 | D | 0.855 | deleterious | N | 0.498812472 | None | None | N |
V/E | 0.8921 | likely_pathogenic | 0.87 | pathogenic | -1.201 | Destabilizing | 0.996 | D | 0.828 | deleterious | None | None | None | None | N |
V/F | 0.6164 | likely_pathogenic | 0.5221 | ambiguous | -0.986 | Destabilizing | 0.968 | D | 0.757 | deleterious | N | 0.484779459 | None | None | N |
V/G | 0.7421 | likely_pathogenic | 0.7152 | pathogenic | -1.859 | Destabilizing | 0.995 | D | 0.83 | deleterious | N | 0.520511125 | None | None | N |
V/H | 0.964 | likely_pathogenic | 0.9547 | pathogenic | -1.324 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
V/I | 0.0847 | likely_benign | 0.0818 | benign | -0.532 | Destabilizing | 0.011 | N | 0.183 | neutral | N | 0.434655058 | None | None | N |
V/K | 0.9123 | likely_pathogenic | 0.9066 | pathogenic | -1.344 | Destabilizing | 0.988 | D | 0.829 | deleterious | None | None | None | None | N |
V/L | 0.4509 | ambiguous | 0.397 | ambiguous | -0.532 | Destabilizing | 0.437 | N | 0.396 | neutral | N | 0.519407095 | None | None | N |
V/M | 0.44 | ambiguous | 0.3876 | ambiguous | -0.514 | Destabilizing | 0.976 | D | 0.617 | neutral | None | None | None | None | N |
V/N | 0.8747 | likely_pathogenic | 0.8516 | pathogenic | -1.278 | Destabilizing | 0.996 | D | 0.848 | deleterious | None | None | None | None | N |
V/P | 0.61 | likely_pathogenic | 0.6156 | pathogenic | -0.814 | Destabilizing | 0.996 | D | 0.831 | deleterious | None | None | None | None | N |
V/Q | 0.8848 | likely_pathogenic | 0.8703 | pathogenic | -1.333 | Destabilizing | 0.996 | D | 0.822 | deleterious | None | None | None | None | N |
V/R | 0.8894 | likely_pathogenic | 0.8764 | pathogenic | -0.907 | Destabilizing | 0.996 | D | 0.853 | deleterious | None | None | None | None | N |
V/S | 0.7898 | likely_pathogenic | 0.7572 | pathogenic | -1.853 | Destabilizing | 0.988 | D | 0.779 | deleterious | None | None | None | None | N |
V/T | 0.6394 | likely_pathogenic | 0.6115 | pathogenic | -1.663 | Destabilizing | 0.919 | D | 0.605 | neutral | None | None | None | None | N |
V/W | 0.9745 | likely_pathogenic | 0.9608 | pathogenic | -1.223 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
V/Y | 0.9196 | likely_pathogenic | 0.8868 | pathogenic | -0.906 | Destabilizing | 0.996 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.