Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21671 | 65236;65237;65238 | chr2:178584540;178584539;178584538 | chr2:179449267;179449266;179449265 |
N2AB | 20030 | 60313;60314;60315 | chr2:178584540;178584539;178584538 | chr2:179449267;179449266;179449265 |
N2A | 19103 | 57532;57533;57534 | chr2:178584540;178584539;178584538 | chr2:179449267;179449266;179449265 |
N2B | 12606 | 38041;38042;38043 | chr2:178584540;178584539;178584538 | chr2:179449267;179449266;179449265 |
Novex-1 | 12731 | 38416;38417;38418 | chr2:178584540;178584539;178584538 | chr2:179449267;179449266;179449265 |
Novex-2 | 12798 | 38617;38618;38619 | chr2:178584540;178584539;178584538 | chr2:179449267;179449266;179449265 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs764854284 | -0.688 | 0.543 | N | 0.214 | 0.202 | 0.309530620856 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.56E-05 | None | 0 | 8.9E-06 | 0 |
V/I | rs764854284 | -0.688 | 0.543 | N | 0.214 | 0.202 | 0.309530620856 | gnomAD-4.0.0 | 1.27495E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14512E-05 | 5.7374E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3537 | ambiguous | 0.377 | ambiguous | -1.882 | Destabilizing | 0.994 | D | 0.421 | neutral | N | 0.462668378 | None | None | N |
V/C | 0.7924 | likely_pathogenic | 0.7966 | pathogenic | -1.418 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/D | 0.8352 | likely_pathogenic | 0.8615 | pathogenic | -2.357 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | N | 0.500036559 | None | None | N |
V/E | 0.666 | likely_pathogenic | 0.6705 | pathogenic | -2.264 | Highly Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
V/F | 0.4624 | ambiguous | 0.4533 | ambiguous | -1.272 | Destabilizing | 0.998 | D | 0.732 | prob.delet. | N | 0.47480596 | None | None | N |
V/G | 0.4663 | ambiguous | 0.4911 | ambiguous | -2.3 | Highly Destabilizing | 0.999 | D | 0.785 | deleterious | N | 0.512406822 | None | None | N |
V/H | 0.8814 | likely_pathogenic | 0.8784 | pathogenic | -2.015 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
V/I | 0.0949 | likely_benign | 0.0932 | benign | -0.775 | Destabilizing | 0.543 | D | 0.214 | neutral | N | 0.434113553 | None | None | N |
V/K | 0.7346 | likely_pathogenic | 0.7316 | pathogenic | -1.611 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
V/L | 0.5248 | ambiguous | 0.5174 | ambiguous | -0.775 | Destabilizing | 0.948 | D | 0.315 | neutral | N | 0.516385433 | None | None | N |
V/M | 0.3149 | likely_benign | 0.3253 | benign | -0.697 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | N |
V/N | 0.6607 | likely_pathogenic | 0.6816 | pathogenic | -1.611 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
V/P | 0.8532 | likely_pathogenic | 0.8831 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
V/Q | 0.6399 | likely_pathogenic | 0.6238 | pathogenic | -1.66 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
V/R | 0.6837 | likely_pathogenic | 0.6686 | pathogenic | -1.234 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
V/S | 0.4998 | ambiguous | 0.5293 | ambiguous | -2.144 | Highly Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
V/T | 0.3582 | ambiguous | 0.3632 | ambiguous | -1.938 | Destabilizing | 0.996 | D | 0.525 | neutral | None | None | None | None | N |
V/W | 0.934 | likely_pathogenic | 0.9345 | pathogenic | -1.668 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
V/Y | 0.7973 | likely_pathogenic | 0.8026 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.