Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21675 | 65248;65249;65250 | chr2:178584528;178584527;178584526 | chr2:179449255;179449254;179449253 |
N2AB | 20034 | 60325;60326;60327 | chr2:178584528;178584527;178584526 | chr2:179449255;179449254;179449253 |
N2A | 19107 | 57544;57545;57546 | chr2:178584528;178584527;178584526 | chr2:179449255;179449254;179449253 |
N2B | 12610 | 38053;38054;38055 | chr2:178584528;178584527;178584526 | chr2:179449255;179449254;179449253 |
Novex-1 | 12735 | 38428;38429;38430 | chr2:178584528;178584527;178584526 | chr2:179449255;179449254;179449253 |
Novex-2 | 12802 | 38629;38630;38631 | chr2:178584528;178584527;178584526 | chr2:179449255;179449254;179449253 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | 0.028 | N | 0.257 | 0.33 | 0.413635276047 | gnomAD-4.0.0 | 1.59268E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8603E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4138 | ambiguous | 0.408 | ambiguous | -1.711 | Destabilizing | 0.206 | N | 0.332 | neutral | None | None | None | None | N |
C/D | 0.8277 | likely_pathogenic | 0.8187 | pathogenic | -1.312 | Destabilizing | 0.742 | D | 0.63 | neutral | None | None | None | None | N |
C/E | 0.8749 | likely_pathogenic | 0.8715 | pathogenic | -1.152 | Destabilizing | 0.91 | D | 0.661 | neutral | None | None | None | None | N |
C/F | 0.3114 | likely_benign | 0.3179 | benign | -1.192 | Destabilizing | 0.003 | N | 0.365 | neutral | N | 0.425261996 | None | None | N |
C/G | 0.2416 | likely_benign | 0.2294 | benign | -2.038 | Highly Destabilizing | 0.521 | D | 0.543 | neutral | N | 0.455718189 | None | None | N |
C/H | 0.5194 | ambiguous | 0.5014 | ambiguous | -2.3 | Highly Destabilizing | 0.984 | D | 0.673 | neutral | None | None | None | None | N |
C/I | 0.6129 | likely_pathogenic | 0.6418 | pathogenic | -0.858 | Destabilizing | 0.742 | D | 0.515 | neutral | None | None | None | None | N |
C/K | 0.8628 | likely_pathogenic | 0.8753 | pathogenic | -1.252 | Destabilizing | 0.742 | D | 0.627 | neutral | None | None | None | None | N |
C/L | 0.5769 | likely_pathogenic | 0.5843 | pathogenic | -0.858 | Destabilizing | 0.373 | N | 0.395 | neutral | None | None | None | None | N |
C/M | 0.6041 | likely_pathogenic | 0.6145 | pathogenic | 0.004 | Stabilizing | 0.984 | D | 0.641 | neutral | None | None | None | None | N |
C/N | 0.4695 | ambiguous | 0.4425 | ambiguous | -1.531 | Destabilizing | 0.91 | D | 0.675 | prob.neutral | None | None | None | None | N |
C/P | 0.9961 | likely_pathogenic | 0.9965 | pathogenic | -1.118 | Destabilizing | 0.953 | D | 0.676 | prob.neutral | None | None | None | None | N |
C/Q | 0.6492 | likely_pathogenic | 0.6433 | pathogenic | -1.31 | Destabilizing | 0.91 | D | 0.675 | prob.neutral | None | None | None | None | N |
C/R | 0.5491 | ambiguous | 0.5517 | ambiguous | -1.35 | Destabilizing | 0.884 | D | 0.677 | prob.neutral | N | 0.459681214 | None | None | N |
C/S | 0.2468 | likely_benign | 0.2382 | benign | -1.916 | Destabilizing | 0.028 | N | 0.257 | neutral | N | 0.340077523 | None | None | N |
C/T | 0.3819 | ambiguous | 0.3798 | ambiguous | -1.578 | Destabilizing | 0.59 | D | 0.501 | neutral | None | None | None | None | N |
C/V | 0.4853 | ambiguous | 0.5033 | ambiguous | -1.118 | Destabilizing | 0.742 | D | 0.505 | neutral | None | None | None | None | N |
C/W | 0.6692 | likely_pathogenic | 0.6466 | pathogenic | -1.434 | Destabilizing | 0.994 | D | 0.635 | neutral | N | 0.472573154 | None | None | N |
C/Y | 0.3646 | ambiguous | 0.3608 | ambiguous | -1.284 | Destabilizing | 0.521 | D | 0.574 | neutral | N | 0.445578554 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.