Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21676 | 65251;65252;65253 | chr2:178584525;178584524;178584523 | chr2:179449252;179449251;179449250 |
N2AB | 20035 | 60328;60329;60330 | chr2:178584525;178584524;178584523 | chr2:179449252;179449251;179449250 |
N2A | 19108 | 57547;57548;57549 | chr2:178584525;178584524;178584523 | chr2:179449252;179449251;179449250 |
N2B | 12611 | 38056;38057;38058 | chr2:178584525;178584524;178584523 | chr2:179449252;179449251;179449250 |
Novex-1 | 12736 | 38431;38432;38433 | chr2:178584525;178584524;178584523 | chr2:179449252;179449251;179449250 |
Novex-2 | 12803 | 38632;38633;38634 | chr2:178584525;178584524;178584523 | chr2:179449252;179449251;179449250 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs753882887 | -3.307 | 0.684 | N | 0.719 | 0.327 | 0.633825615615 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
I/T | rs753882887 | -3.307 | 0.684 | N | 0.719 | 0.327 | 0.633825615615 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
I/T | rs753882887 | -3.307 | 0.684 | N | 0.719 | 0.327 | 0.633825615615 | gnomAD-4.0.0 | 4.33943E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.59022E-05 | 1.602E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6562 | likely_pathogenic | 0.6466 | pathogenic | -3.079 | Highly Destabilizing | 0.004 | N | 0.487 | neutral | None | None | None | None | N |
I/C | 0.7846 | likely_pathogenic | 0.7905 | pathogenic | -2.207 | Highly Destabilizing | 0.987 | D | 0.773 | deleterious | None | None | None | None | N |
I/D | 0.995 | likely_pathogenic | 0.9944 | pathogenic | -3.468 | Highly Destabilizing | 0.953 | D | 0.788 | deleterious | None | None | None | None | N |
I/E | 0.993 | likely_pathogenic | 0.9922 | pathogenic | -3.149 | Highly Destabilizing | 0.91 | D | 0.773 | deleterious | None | None | None | None | N |
I/F | 0.6073 | likely_pathogenic | 0.5623 | ambiguous | -1.764 | Destabilizing | 0.884 | D | 0.732 | prob.delet. | N | 0.51784687 | None | None | N |
I/G | 0.9554 | likely_pathogenic | 0.948 | pathogenic | -3.686 | Highly Destabilizing | 0.59 | D | 0.742 | deleterious | None | None | None | None | N |
I/H | 0.9838 | likely_pathogenic | 0.9804 | pathogenic | -3.208 | Highly Destabilizing | 0.996 | D | 0.768 | deleterious | None | None | None | None | N |
I/K | 0.9873 | likely_pathogenic | 0.9864 | pathogenic | -2.167 | Highly Destabilizing | 0.742 | D | 0.767 | deleterious | None | None | None | None | N |
I/L | 0.2 | likely_benign | 0.1886 | benign | -1.245 | Destabilizing | 0.164 | N | 0.446 | neutral | N | 0.474781166 | None | None | N |
I/M | 0.1668 | likely_benign | 0.1596 | benign | -1.436 | Destabilizing | 0.164 | N | 0.455 | neutral | N | 0.431633395 | None | None | N |
I/N | 0.9374 | likely_pathogenic | 0.9344 | pathogenic | -2.811 | Highly Destabilizing | 0.939 | D | 0.799 | deleterious | N | 0.489996926 | None | None | N |
I/P | 0.9921 | likely_pathogenic | 0.9902 | pathogenic | -1.849 | Destabilizing | 0.953 | D | 0.792 | deleterious | None | None | None | None | N |
I/Q | 0.9733 | likely_pathogenic | 0.9704 | pathogenic | -2.479 | Highly Destabilizing | 0.953 | D | 0.801 | deleterious | None | None | None | None | N |
I/R | 0.9727 | likely_pathogenic | 0.9706 | pathogenic | -2.162 | Highly Destabilizing | 0.953 | D | 0.797 | deleterious | None | None | None | None | N |
I/S | 0.8087 | likely_pathogenic | 0.8026 | pathogenic | -3.43 | Highly Destabilizing | 0.521 | D | 0.733 | prob.delet. | N | 0.489489947 | None | None | N |
I/T | 0.8633 | likely_pathogenic | 0.8539 | pathogenic | -2.951 | Highly Destabilizing | 0.684 | D | 0.719 | prob.delet. | N | 0.489236458 | None | None | N |
I/V | 0.1171 | likely_benign | 0.1133 | benign | -1.849 | Destabilizing | 0.012 | N | 0.201 | neutral | N | 0.389647913 | None | None | N |
I/W | 0.9945 | likely_pathogenic | 0.9915 | pathogenic | -2.105 | Highly Destabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | N |
I/Y | 0.9505 | likely_pathogenic | 0.9403 | pathogenic | -1.97 | Destabilizing | 0.984 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.