Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21691 | 65296;65297;65298 | chr2:178584480;178584479;178584478 | chr2:179449207;179449206;179449205 |
N2AB | 20050 | 60373;60374;60375 | chr2:178584480;178584479;178584478 | chr2:179449207;179449206;179449205 |
N2A | 19123 | 57592;57593;57594 | chr2:178584480;178584479;178584478 | chr2:179449207;179449206;179449205 |
N2B | 12626 | 38101;38102;38103 | chr2:178584480;178584479;178584478 | chr2:179449207;179449206;179449205 |
Novex-1 | 12751 | 38476;38477;38478 | chr2:178584480;178584479;178584478 | chr2:179449207;179449206;179449205 |
Novex-2 | 12818 | 38677;38678;38679 | chr2:178584480;178584479;178584478 | chr2:179449207;179449206;179449205 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | -1.782 | 0.998 | D | 0.839 | 0.519 | 0.86998522814 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/N | None | -1.782 | 0.998 | D | 0.839 | 0.519 | 0.86998522814 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/N | None | -1.782 | 0.998 | D | 0.839 | 0.519 | 0.86998522814 | gnomAD-4.0.0 | 5.5791E-06 | None | None | None | None | I | None | 0 | 1.66789E-05 | None | 0 | 0 | None | 0 | 0 | 6.78235E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9268 | likely_pathogenic | 0.9301 | pathogenic | -2.353 | Highly Destabilizing | 0.985 | D | 0.677 | prob.neutral | None | None | None | None | I |
I/C | 0.9474 | likely_pathogenic | 0.9433 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
I/D | 0.9941 | likely_pathogenic | 0.9942 | pathogenic | -2.239 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | I |
I/E | 0.9859 | likely_pathogenic | 0.9875 | pathogenic | -2.107 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | I |
I/F | 0.8582 | likely_pathogenic | 0.8528 | pathogenic | -1.534 | Destabilizing | 0.989 | D | 0.695 | prob.neutral | D | 0.52322015 | None | None | I |
I/G | 0.9873 | likely_pathogenic | 0.9873 | pathogenic | -2.819 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
I/H | 0.9894 | likely_pathogenic | 0.9882 | pathogenic | -2.158 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
I/K | 0.9793 | likely_pathogenic | 0.9797 | pathogenic | -1.703 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | I |
I/L | 0.2597 | likely_benign | 0.2367 | benign | -1.056 | Destabilizing | 0.031 | N | 0.19 | neutral | N | 0.511539761 | None | None | I |
I/M | 0.4739 | ambiguous | 0.4483 | ambiguous | -0.804 | Destabilizing | 0.989 | D | 0.685 | prob.neutral | D | 0.525755045 | None | None | I |
I/N | 0.9228 | likely_pathogenic | 0.9116 | pathogenic | -1.762 | Destabilizing | 0.998 | D | 0.839 | deleterious | D | 0.526769003 | None | None | I |
I/P | 0.9153 | likely_pathogenic | 0.9399 | pathogenic | -1.464 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | I |
I/Q | 0.981 | likely_pathogenic | 0.9818 | pathogenic | -1.782 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | I |
I/R | 0.9716 | likely_pathogenic | 0.9728 | pathogenic | -1.232 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | I |
I/S | 0.9542 | likely_pathogenic | 0.9531 | pathogenic | -2.459 | Highly Destabilizing | 0.998 | D | 0.797 | deleterious | D | 0.526008534 | None | None | I |
I/T | 0.9196 | likely_pathogenic | 0.9089 | pathogenic | -2.196 | Highly Destabilizing | 0.98 | D | 0.754 | deleterious | N | 0.503131339 | None | None | I |
I/V | 0.079 | likely_benign | 0.0761 | benign | -1.464 | Destabilizing | 0.689 | D | 0.417 | neutral | N | 0.47296273 | None | None | I |
I/W | 0.9956 | likely_pathogenic | 0.9951 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
I/Y | 0.9751 | likely_pathogenic | 0.9767 | pathogenic | -1.557 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.