Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21695 | 65308;65309;65310 | chr2:178584468;178584467;178584466 | chr2:179449195;179449194;179449193 |
N2AB | 20054 | 60385;60386;60387 | chr2:178584468;178584467;178584466 | chr2:179449195;179449194;179449193 |
N2A | 19127 | 57604;57605;57606 | chr2:178584468;178584467;178584466 | chr2:179449195;179449194;179449193 |
N2B | 12630 | 38113;38114;38115 | chr2:178584468;178584467;178584466 | chr2:179449195;179449194;179449193 |
Novex-1 | 12755 | 38488;38489;38490 | chr2:178584468;178584467;178584466 | chr2:179449195;179449194;179449193 |
Novex-2 | 12822 | 38689;38690;38691 | chr2:178584468;178584467;178584466 | chr2:179449195;179449194;179449193 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs1174402887 | -1.559 | 0.989 | N | 0.632 | 0.3 | 0.729612430995 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/R | rs1174402887 | -1.559 | 0.989 | N | 0.632 | 0.3 | 0.729612430995 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2543 | likely_benign | 0.2271 | benign | -2.297 | Highly Destabilizing | 0.525 | D | 0.593 | neutral | None | None | None | None | N |
L/C | 0.3745 | ambiguous | 0.3601 | ambiguous | -1.351 | Destabilizing | 0.016 | N | 0.493 | neutral | None | None | None | None | N |
L/D | 0.7641 | likely_pathogenic | 0.7455 | pathogenic | -2.512 | Highly Destabilizing | 0.991 | D | 0.652 | neutral | None | None | None | None | N |
L/E | 0.4061 | ambiguous | 0.3815 | ambiguous | -2.291 | Highly Destabilizing | 0.974 | D | 0.66 | neutral | None | None | None | None | N |
L/F | 0.1082 | likely_benign | 0.1005 | benign | -1.308 | Destabilizing | 0.037 | N | 0.48 | neutral | None | None | None | None | N |
L/G | 0.6195 | likely_pathogenic | 0.5959 | pathogenic | -2.817 | Highly Destabilizing | 0.974 | D | 0.659 | neutral | None | None | None | None | N |
L/H | 0.136 | likely_benign | 0.1365 | benign | -2.313 | Highly Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
L/I | 0.0823 | likely_benign | 0.0765 | benign | -0.798 | Destabilizing | 0.067 | N | 0.479 | neutral | None | None | None | None | N |
L/K | 0.2791 | likely_benign | 0.286 | benign | -1.685 | Destabilizing | 0.974 | D | 0.631 | neutral | None | None | None | None | N |
L/M | 0.0917 | likely_benign | 0.09 | benign | -0.69 | Destabilizing | 0.966 | D | 0.661 | neutral | N | 0.463628384 | None | None | N |
L/N | 0.3462 | ambiguous | 0.3262 | benign | -1.991 | Destabilizing | 0.991 | D | 0.671 | neutral | None | None | None | None | N |
L/P | 0.969 | likely_pathogenic | 0.9694 | pathogenic | -1.279 | Destabilizing | 0.989 | D | 0.673 | neutral | D | 0.522713973 | None | None | N |
L/Q | 0.1238 | likely_benign | 0.12 | benign | -1.852 | Destabilizing | 0.989 | D | 0.623 | neutral | N | 0.456507623 | None | None | N |
L/R | 0.187 | likely_benign | 0.187 | benign | -1.432 | Destabilizing | 0.989 | D | 0.632 | neutral | N | 0.43536156 | None | None | N |
L/S | 0.2843 | likely_benign | 0.2564 | benign | -2.647 | Highly Destabilizing | 0.915 | D | 0.625 | neutral | None | None | None | None | N |
L/T | 0.1894 | likely_benign | 0.1672 | benign | -2.294 | Highly Destabilizing | 0.842 | D | 0.616 | neutral | None | None | None | None | N |
L/V | 0.0786 | likely_benign | 0.073 | benign | -1.279 | Destabilizing | 0.012 | N | 0.391 | neutral | N | 0.406292234 | None | None | N |
L/W | 0.2427 | likely_benign | 0.2526 | benign | -1.732 | Destabilizing | 0.998 | D | 0.64 | neutral | None | None | None | None | N |
L/Y | 0.2327 | likely_benign | 0.2377 | benign | -1.414 | Destabilizing | 0.904 | D | 0.651 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.