Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21700 | 65323;65324;65325 | chr2:178584453;178584452;178584451 | chr2:179449180;179449179;179449178 |
N2AB | 20059 | 60400;60401;60402 | chr2:178584453;178584452;178584451 | chr2:179449180;179449179;179449178 |
N2A | 19132 | 57619;57620;57621 | chr2:178584453;178584452;178584451 | chr2:179449180;179449179;179449178 |
N2B | 12635 | 38128;38129;38130 | chr2:178584453;178584452;178584451 | chr2:179449180;179449179;179449178 |
Novex-1 | 12760 | 38503;38504;38505 | chr2:178584453;178584452;178584451 | chr2:179449180;179449179;179449178 |
Novex-2 | 12827 | 38704;38705;38706 | chr2:178584453;178584452;178584451 | chr2:179449180;179449179;179449178 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2048488125 | None | 1.0 | N | 0.673 | 0.561 | 0.611786747218 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs2048488125 | None | 1.0 | N | 0.673 | 0.561 | 0.611786747218 | gnomAD-4.0.0 | 6.57678E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47093E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9212 | likely_pathogenic | 0.8944 | pathogenic | -0.849 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.48491759 | None | None | N |
E/C | 0.9954 | likely_pathogenic | 0.9927 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/D | 0.656 | likely_pathogenic | 0.5871 | pathogenic | -1.126 | Destabilizing | 0.999 | D | 0.433 | neutral | N | 0.508053951 | None | None | N |
E/F | 0.9977 | likely_pathogenic | 0.9967 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/G | 0.9068 | likely_pathogenic | 0.8914 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.490539904 | None | None | N |
E/H | 0.9903 | likely_pathogenic | 0.9846 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
E/I | 0.9897 | likely_pathogenic | 0.9835 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/K | 0.9638 | likely_pathogenic | 0.9503 | pathogenic | -0.555 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.487889323 | None | None | N |
E/L | 0.9862 | likely_pathogenic | 0.9767 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/M | 0.9858 | likely_pathogenic | 0.9787 | pathogenic | 0.71 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
E/N | 0.9644 | likely_pathogenic | 0.9533 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/P | 0.986 | likely_pathogenic | 0.9805 | pathogenic | -0.084 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/Q | 0.8455 | likely_pathogenic | 0.79 | pathogenic | -1.032 | Destabilizing | 1.0 | D | 0.611 | neutral | N | 0.474584789 | None | None | N |
E/R | 0.9733 | likely_pathogenic | 0.9606 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/S | 0.9558 | likely_pathogenic | 0.9438 | pathogenic | -1.539 | Destabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
E/T | 0.982 | likely_pathogenic | 0.9766 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/V | 0.967 | likely_pathogenic | 0.951 | pathogenic | -0.084 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.500250368 | None | None | N |
E/W | 0.9988 | likely_pathogenic | 0.9981 | pathogenic | 0.266 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/Y | 0.9943 | likely_pathogenic | 0.9921 | pathogenic | 0.23 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.