Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21702 | 65329;65330;65331 | chr2:178584447;178584446;178584445 | chr2:179449174;179449173;179449172 |
N2AB | 20061 | 60406;60407;60408 | chr2:178584447;178584446;178584445 | chr2:179449174;179449173;179449172 |
N2A | 19134 | 57625;57626;57627 | chr2:178584447;178584446;178584445 | chr2:179449174;179449173;179449172 |
N2B | 12637 | 38134;38135;38136 | chr2:178584447;178584446;178584445 | chr2:179449174;179449173;179449172 |
Novex-1 | 12762 | 38509;38510;38511 | chr2:178584447;178584446;178584445 | chr2:179449174;179449173;179449172 |
Novex-2 | 12829 | 38710;38711;38712 | chr2:178584447;178584446;178584445 | chr2:179449174;179449173;179449172 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs753302897 | 0.496 | 1.0 | N | 0.553 | 0.348 | 0.218845423259 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/K | rs753302897 | 0.496 | 1.0 | N | 0.553 | 0.348 | 0.218845423259 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8667 | likely_pathogenic | 0.8123 | pathogenic | -0.104 | Destabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | I |
N/C | 0.8182 | likely_pathogenic | 0.7718 | pathogenic | 0.17 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
N/D | 0.7379 | likely_pathogenic | 0.6639 | pathogenic | 0.099 | Stabilizing | 0.999 | D | 0.565 | neutral | N | 0.490948271 | None | None | I |
N/E | 0.9455 | likely_pathogenic | 0.9199 | pathogenic | 0.04 | Stabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | I |
N/F | 0.9551 | likely_pathogenic | 0.9404 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
N/G | 0.7509 | likely_pathogenic | 0.6771 | pathogenic | -0.207 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | I |
N/H | 0.5132 | ambiguous | 0.4391 | ambiguous | -0.191 | Destabilizing | 1.0 | D | 0.581 | neutral | N | 0.478146869 | None | None | I |
N/I | 0.9021 | likely_pathogenic | 0.8779 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.486135812 | None | None | I |
N/K | 0.9269 | likely_pathogenic | 0.893 | pathogenic | 0.147 | Stabilizing | 1.0 | D | 0.553 | neutral | N | 0.507131232 | None | None | I |
N/L | 0.8155 | likely_pathogenic | 0.7767 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
N/M | 0.8809 | likely_pathogenic | 0.8545 | pathogenic | 0.15 | Stabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | I |
N/P | 0.9457 | likely_pathogenic | 0.9288 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
N/Q | 0.8873 | likely_pathogenic | 0.8464 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.573 | neutral | None | None | None | None | I |
N/R | 0.9081 | likely_pathogenic | 0.8686 | pathogenic | 0.238 | Stabilizing | 1.0 | D | 0.586 | neutral | None | None | None | None | I |
N/S | 0.3394 | likely_benign | 0.2894 | benign | -0.047 | Destabilizing | 0.999 | D | 0.499 | neutral | N | 0.499607826 | None | None | I |
N/T | 0.6579 | likely_pathogenic | 0.6022 | pathogenic | 0.013 | Stabilizing | 0.999 | D | 0.541 | neutral | N | 0.497703672 | None | None | I |
N/V | 0.8984 | likely_pathogenic | 0.8674 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
N/W | 0.98 | likely_pathogenic | 0.9719 | pathogenic | -0.793 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
N/Y | 0.6636 | likely_pathogenic | 0.6089 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.634 | neutral | N | 0.473133666 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.