Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21704 | 65335;65336;65337 | chr2:178584441;178584440;178584439 | chr2:179449168;179449167;179449166 |
N2AB | 20063 | 60412;60413;60414 | chr2:178584441;178584440;178584439 | chr2:179449168;179449167;179449166 |
N2A | 19136 | 57631;57632;57633 | chr2:178584441;178584440;178584439 | chr2:179449168;179449167;179449166 |
N2B | 12639 | 38140;38141;38142 | chr2:178584441;178584440;178584439 | chr2:179449168;179449167;179449166 |
Novex-1 | 12764 | 38515;38516;38517 | chr2:178584441;178584440;178584439 | chr2:179449168;179449167;179449166 |
Novex-2 | 12831 | 38716;38717;38718 | chr2:178584441;178584440;178584439 | chr2:179449168;179449167;179449166 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.612 | 0.302 | 0.435699915968 | gnomAD-4.0.0 | 3.42198E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49822E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7694 | likely_pathogenic | 0.7362 | pathogenic | -0.503 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | I |
L/C | 0.9248 | likely_pathogenic | 0.9002 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | I |
L/D | 0.9755 | likely_pathogenic | 0.9698 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
L/E | 0.9188 | likely_pathogenic | 0.9096 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
L/F | 0.6148 | likely_pathogenic | 0.5627 | ambiguous | -0.649 | Destabilizing | 1.0 | D | 0.612 | neutral | N | 0.471951442 | None | None | I |
L/G | 0.9378 | likely_pathogenic | 0.9247 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
L/H | 0.8134 | likely_pathogenic | 0.7931 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
L/I | 0.1722 | likely_benign | 0.1654 | benign | -0.409 | Destabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | I |
L/K | 0.8244 | likely_pathogenic | 0.8185 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
L/M | 0.31 | likely_benign | 0.2694 | benign | -0.698 | Destabilizing | 1.0 | D | 0.589 | neutral | N | 0.497066167 | None | None | I |
L/N | 0.867 | likely_pathogenic | 0.8375 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
L/P | 0.7647 | likely_pathogenic | 0.7409 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
L/Q | 0.7174 | likely_pathogenic | 0.6932 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
L/R | 0.7291 | likely_pathogenic | 0.7222 | pathogenic | 0.006 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
L/S | 0.8756 | likely_pathogenic | 0.8518 | pathogenic | -0.702 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.451312447 | None | None | I |
L/T | 0.7809 | likely_pathogenic | 0.751 | pathogenic | -0.686 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
L/V | 0.2776 | likely_benign | 0.2431 | benign | -0.416 | Destabilizing | 0.999 | D | 0.523 | neutral | N | 0.485675737 | None | None | I |
L/W | 0.8046 | likely_pathogenic | 0.7789 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.483725821 | None | None | I |
L/Y | 0.8524 | likely_pathogenic | 0.8156 | pathogenic | -0.456 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.