Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21711 | 65356;65357;65358 | chr2:178584420;178584419;178584418 | chr2:179449147;179449146;179449145 |
N2AB | 20070 | 60433;60434;60435 | chr2:178584420;178584419;178584418 | chr2:179449147;179449146;179449145 |
N2A | 19143 | 57652;57653;57654 | chr2:178584420;178584419;178584418 | chr2:179449147;179449146;179449145 |
N2B | 12646 | 38161;38162;38163 | chr2:178584420;178584419;178584418 | chr2:179449147;179449146;179449145 |
Novex-1 | 12771 | 38536;38537;38538 | chr2:178584420;178584419;178584418 | chr2:179449147;179449146;179449145 |
Novex-2 | 12838 | 38737;38738;38739 | chr2:178584420;178584419;178584418 | chr2:179449147;179449146;179449145 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.978 | N | 0.49 | 0.406 | 0.404733080969 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3271 | likely_benign | 0.2752 | benign | 0.043 | Stabilizing | 0.978 | D | 0.49 | neutral | N | 0.487579892 | None | None | I |
D/C | 0.8266 | likely_pathogenic | 0.7886 | pathogenic | 0.069 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
D/E | 0.188 | likely_benign | 0.162 | benign | -0.197 | Destabilizing | 0.198 | N | 0.261 | neutral | N | 0.408849749 | None | None | I |
D/F | 0.8651 | likely_pathogenic | 0.8336 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | I |
D/G | 0.296 | likely_benign | 0.2665 | benign | -0.061 | Destabilizing | 0.989 | D | 0.547 | neutral | N | 0.488273325 | None | None | I |
D/H | 0.4765 | ambiguous | 0.4099 | ambiguous | 0.354 | Stabilizing | 1.0 | D | 0.502 | neutral | N | 0.507032444 | None | None | I |
D/I | 0.6635 | likely_pathogenic | 0.6142 | pathogenic | 0.245 | Stabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | I |
D/K | 0.5405 | ambiguous | 0.4821 | ambiguous | 0.507 | Stabilizing | 0.983 | D | 0.541 | neutral | None | None | None | None | I |
D/L | 0.6482 | likely_pathogenic | 0.5967 | pathogenic | 0.245 | Stabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | I |
D/M | 0.8201 | likely_pathogenic | 0.7733 | pathogenic | 0.16 | Stabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | I |
D/N | 0.1637 | likely_benign | 0.1372 | benign | 0.399 | Stabilizing | 0.989 | D | 0.502 | neutral | N | 0.486387813 | None | None | I |
D/P | 0.7458 | likely_pathogenic | 0.6946 | pathogenic | 0.197 | Stabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | I |
D/Q | 0.4854 | ambiguous | 0.4235 | ambiguous | 0.382 | Stabilizing | 0.995 | D | 0.5 | neutral | None | None | None | None | I |
D/R | 0.5875 | likely_pathogenic | 0.5201 | ambiguous | 0.648 | Stabilizing | 0.995 | D | 0.541 | neutral | None | None | None | None | I |
D/S | 0.2134 | likely_benign | 0.1846 | benign | 0.276 | Stabilizing | 0.983 | D | 0.513 | neutral | None | None | None | None | I |
D/T | 0.3866 | ambiguous | 0.3367 | benign | 0.357 | Stabilizing | 0.998 | D | 0.471 | neutral | None | None | None | None | I |
D/V | 0.4422 | ambiguous | 0.3972 | ambiguous | 0.197 | Stabilizing | 0.997 | D | 0.597 | neutral | N | 0.501797196 | None | None | I |
D/W | 0.9574 | likely_pathogenic | 0.9473 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
D/Y | 0.4778 | ambiguous | 0.4476 | ambiguous | 0.088 | Stabilizing | 1.0 | D | 0.579 | neutral | N | 0.510648752 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.