Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21713 | 65362;65363;65364 | chr2:178584414;178584413;178584412 | chr2:179449141;179449140;179449139 |
N2AB | 20072 | 60439;60440;60441 | chr2:178584414;178584413;178584412 | chr2:179449141;179449140;179449139 |
N2A | 19145 | 57658;57659;57660 | chr2:178584414;178584413;178584412 | chr2:179449141;179449140;179449139 |
N2B | 12648 | 38167;38168;38169 | chr2:178584414;178584413;178584412 | chr2:179449141;179449140;179449139 |
Novex-1 | 12773 | 38542;38543;38544 | chr2:178584414;178584413;178584412 | chr2:179449141;179449140;179449139 |
Novex-2 | 12840 | 38743;38744;38745 | chr2:178584414;178584413;178584412 | chr2:179449141;179449140;179449139 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs759672249 | -1.336 | 0.171 | N | 0.419 | 0.133 | 0.239901079897 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/F | rs759672249 | -1.336 | 0.171 | N | 0.419 | 0.133 | 0.239901079897 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | N | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1317 | likely_benign | 0.1089 | benign | -1.478 | Destabilizing | None | N | 0.22 | neutral | None | None | None | None | N |
L/C | 0.4762 | ambiguous | 0.41 | ambiguous | -0.915 | Destabilizing | 0.676 | D | 0.365 | neutral | None | None | None | None | N |
L/D | 0.7506 | likely_pathogenic | 0.7033 | pathogenic | -0.59 | Destabilizing | 0.214 | N | 0.431 | neutral | None | None | None | None | N |
L/E | 0.4243 | ambiguous | 0.3869 | ambiguous | -0.568 | Destabilizing | 0.072 | N | 0.418 | neutral | None | None | None | None | N |
L/F | 0.2386 | likely_benign | 0.2049 | benign | -0.928 | Destabilizing | 0.171 | N | 0.419 | neutral | N | 0.47261346 | None | None | N |
L/G | 0.5575 | ambiguous | 0.4585 | ambiguous | -1.817 | Destabilizing | 0.038 | N | 0.359 | neutral | None | None | None | None | N |
L/H | 0.3399 | likely_benign | 0.2931 | benign | -0.966 | Destabilizing | 0.828 | D | 0.429 | neutral | N | 0.510883613 | None | None | N |
L/I | 0.082 | likely_benign | 0.0755 | benign | -0.625 | Destabilizing | None | N | 0.225 | neutral | N | 0.477576329 | None | None | N |
L/K | 0.3772 | ambiguous | 0.3435 | ambiguous | -0.912 | Destabilizing | 0.072 | N | 0.381 | neutral | None | None | None | None | N |
L/M | 0.1197 | likely_benign | 0.1097 | benign | -0.539 | Destabilizing | 0.214 | N | 0.449 | neutral | None | None | None | None | N |
L/N | 0.4031 | ambiguous | 0.3372 | benign | -0.759 | Destabilizing | 0.214 | N | 0.412 | neutral | None | None | None | None | N |
L/P | 0.0821 | likely_benign | 0.0708 | benign | -0.877 | Destabilizing | None | N | 0.362 | neutral | N | 0.404486866 | None | None | N |
L/Q | 0.2211 | likely_benign | 0.1886 | benign | -0.876 | Destabilizing | 0.356 | N | 0.381 | neutral | None | None | None | None | N |
L/R | 0.3101 | likely_benign | 0.281 | benign | -0.395 | Destabilizing | 0.295 | N | 0.361 | neutral | N | 0.502128057 | None | None | N |
L/S | 0.2829 | likely_benign | 0.2156 | benign | -1.438 | Destabilizing | 0.003 | N | 0.347 | neutral | None | None | None | None | N |
L/T | 0.1519 | likely_benign | 0.1218 | benign | -1.288 | Destabilizing | 0.038 | N | 0.347 | neutral | None | None | None | None | N |
L/V | 0.0804 | likely_benign | 0.0682 | benign | -0.877 | Destabilizing | None | N | 0.119 | neutral | N | 0.443036894 | None | None | N |
L/W | 0.4351 | ambiguous | 0.3895 | ambiguous | -0.991 | Destabilizing | 0.864 | D | 0.433 | neutral | None | None | None | None | N |
L/Y | 0.4436 | ambiguous | 0.4065 | ambiguous | -0.761 | Destabilizing | 0.356 | N | 0.378 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.