Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2171365362;65363;65364 chr2:178584414;178584413;178584412chr2:179449141;179449140;179449139
N2AB2007260439;60440;60441 chr2:178584414;178584413;178584412chr2:179449141;179449140;179449139
N2A1914557658;57659;57660 chr2:178584414;178584413;178584412chr2:179449141;179449140;179449139
N2B1264838167;38168;38169 chr2:178584414;178584413;178584412chr2:179449141;179449140;179449139
Novex-11277338542;38543;38544 chr2:178584414;178584413;178584412chr2:179449141;179449140;179449139
Novex-21284038743;38744;38745 chr2:178584414;178584413;178584412chr2:179449141;179449140;179449139
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-45
  • Domain position: 55
  • Structural Position: 75
  • Q(SASA): 0.2141
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs759672249 -1.336 0.171 N 0.419 0.133 0.239901079897 gnomAD-2.1.1 8.06E-06 None None None None N None 0 5.8E-05 None 0 0 None 0 None 0 0 0
L/F rs759672249 -1.336 0.171 N 0.419 0.133 0.239901079897 gnomAD-4.0.0 1.59227E-06 None None None None N None 0 2.28739E-05 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1317 likely_benign 0.1089 benign -1.478 Destabilizing None N 0.22 neutral None None None None N
L/C 0.4762 ambiguous 0.41 ambiguous -0.915 Destabilizing 0.676 D 0.365 neutral None None None None N
L/D 0.7506 likely_pathogenic 0.7033 pathogenic -0.59 Destabilizing 0.214 N 0.431 neutral None None None None N
L/E 0.4243 ambiguous 0.3869 ambiguous -0.568 Destabilizing 0.072 N 0.418 neutral None None None None N
L/F 0.2386 likely_benign 0.2049 benign -0.928 Destabilizing 0.171 N 0.419 neutral N 0.47261346 None None N
L/G 0.5575 ambiguous 0.4585 ambiguous -1.817 Destabilizing 0.038 N 0.359 neutral None None None None N
L/H 0.3399 likely_benign 0.2931 benign -0.966 Destabilizing 0.828 D 0.429 neutral N 0.510883613 None None N
L/I 0.082 likely_benign 0.0755 benign -0.625 Destabilizing None N 0.225 neutral N 0.477576329 None None N
L/K 0.3772 ambiguous 0.3435 ambiguous -0.912 Destabilizing 0.072 N 0.381 neutral None None None None N
L/M 0.1197 likely_benign 0.1097 benign -0.539 Destabilizing 0.214 N 0.449 neutral None None None None N
L/N 0.4031 ambiguous 0.3372 benign -0.759 Destabilizing 0.214 N 0.412 neutral None None None None N
L/P 0.0821 likely_benign 0.0708 benign -0.877 Destabilizing None N 0.362 neutral N 0.404486866 None None N
L/Q 0.2211 likely_benign 0.1886 benign -0.876 Destabilizing 0.356 N 0.381 neutral None None None None N
L/R 0.3101 likely_benign 0.281 benign -0.395 Destabilizing 0.295 N 0.361 neutral N 0.502128057 None None N
L/S 0.2829 likely_benign 0.2156 benign -1.438 Destabilizing 0.003 N 0.347 neutral None None None None N
L/T 0.1519 likely_benign 0.1218 benign -1.288 Destabilizing 0.038 N 0.347 neutral None None None None N
L/V 0.0804 likely_benign 0.0682 benign -0.877 Destabilizing None N 0.119 neutral N 0.443036894 None None N
L/W 0.4351 ambiguous 0.3895 ambiguous -0.991 Destabilizing 0.864 D 0.433 neutral None None None None N
L/Y 0.4436 ambiguous 0.4065 ambiguous -0.761 Destabilizing 0.356 N 0.378 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.