Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21714 | 65365;65366;65367 | chr2:178584411;178584410;178584409 | chr2:179449138;179449137;179449136 |
N2AB | 20073 | 60442;60443;60444 | chr2:178584411;178584410;178584409 | chr2:179449138;179449137;179449136 |
N2A | 19146 | 57661;57662;57663 | chr2:178584411;178584410;178584409 | chr2:179449138;179449137;179449136 |
N2B | 12649 | 38170;38171;38172 | chr2:178584411;178584410;178584409 | chr2:179449138;179449137;179449136 |
Novex-1 | 12774 | 38545;38546;38547 | chr2:178584411;178584410;178584409 | chr2:179449138;179449137;179449136 |
Novex-2 | 12841 | 38746;38747;38748 | chr2:178584411;178584410;178584409 | chr2:179449138;179449137;179449136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs751864769 | -2.318 | 1.0 | N | 0.817 | 0.45 | 0.871969193956 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 1.65948E-04 |
V/G | rs751864769 | -2.318 | 1.0 | N | 0.817 | 0.45 | 0.871969193956 | gnomAD-4.0.0 | 1.59221E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88239E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6927 | likely_pathogenic | 0.6313 | pathogenic | -1.207 | Destabilizing | 0.999 | D | 0.559 | neutral | D | 0.523751336 | None | None | N |
V/C | 0.8627 | likely_pathogenic | 0.825 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
V/D | 0.9777 | likely_pathogenic | 0.9744 | pathogenic | -1.533 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.479607537 | None | None | N |
V/E | 0.936 | likely_pathogenic | 0.928 | pathogenic | -1.274 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
V/F | 0.7714 | likely_pathogenic | 0.7335 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.814 | deleterious | N | 0.487257767 | None | None | N |
V/G | 0.7875 | likely_pathogenic | 0.7622 | pathogenic | -1.763 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.50372278 | None | None | N |
V/H | 0.9736 | likely_pathogenic | 0.9665 | pathogenic | -1.77 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/I | 0.134 | likely_benign | 0.1217 | benign | 0.346 | Stabilizing | 0.997 | D | 0.493 | neutral | N | 0.471266432 | None | None | N |
V/K | 0.9566 | likely_pathogenic | 0.9536 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
V/L | 0.5342 | ambiguous | 0.4714 | ambiguous | 0.346 | Stabilizing | 0.997 | D | 0.546 | neutral | N | 0.47317921 | None | None | N |
V/M | 0.6389 | likely_pathogenic | 0.5807 | pathogenic | 0.233 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
V/N | 0.926 | likely_pathogenic | 0.9094 | pathogenic | -1.077 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/P | 0.928 | likely_pathogenic | 0.9073 | pathogenic | -0.144 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/Q | 0.8969 | likely_pathogenic | 0.8805 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/R | 0.9252 | likely_pathogenic | 0.918 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/S | 0.7966 | likely_pathogenic | 0.7605 | pathogenic | -1.676 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
V/T | 0.7483 | likely_pathogenic | 0.6715 | pathogenic | -1.258 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
V/W | 0.9915 | likely_pathogenic | 0.9888 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/Y | 0.9623 | likely_pathogenic | 0.9546 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.