Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21715 | 65368;65369;65370 | chr2:178584408;178584407;178584406 | chr2:179449135;179449134;179449133 |
N2AB | 20074 | 60445;60446;60447 | chr2:178584408;178584407;178584406 | chr2:179449135;179449134;179449133 |
N2A | 19147 | 57664;57665;57666 | chr2:178584408;178584407;178584406 | chr2:179449135;179449134;179449133 |
N2B | 12650 | 38173;38174;38175 | chr2:178584408;178584407;178584406 | chr2:179449135;179449134;179449133 |
Novex-1 | 12775 | 38548;38549;38550 | chr2:178584408;178584407;178584406 | chr2:179449135;179449134;179449133 |
Novex-2 | 12842 | 38749;38750;38751 | chr2:178584408;178584407;178584406 | chr2:179449135;179449134;179449133 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/L | rs368450785 | 0.31 | 0.996 | N | 0.493 | 0.386 | None | gnomAD-2.1.1 | 6.8E-05 | None | None | None | None | N | None | 4.14E-05 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.25374E-04 | 1.40528E-04 |
R/L | rs368450785 | 0.31 | 0.996 | N | 0.493 | 0.386 | None | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 7.25E-05 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
R/L | rs368450785 | 0.31 | 0.996 | N | 0.493 | 0.386 | None | gnomAD-4.0.0 | 8.05896E-05 | None | None | None | None | N | None | 4.00844E-05 | 1.33458E-04 | None | 0 | 0 | None | 3.12471E-05 | 0 | 9.41074E-05 | 0 | 9.612E-05 |
R/Q | rs368450785 | -0.033 | 0.999 | N | 0.554 | 0.292 | 0.207176502487 | gnomAD-2.1.1 | 4.83E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.9613E-04 | None | 0 | 3.57E-05 | 3.31785E-04 |
R/Q | rs368450785 | -0.033 | 0.999 | N | 0.554 | 0.292 | 0.207176502487 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 6.22148E-04 | 0 |
R/Q | rs368450785 | -0.033 | 0.999 | N | 0.554 | 0.292 | 0.207176502487 | gnomAD-4.0.0 | 4.02948E-05 | None | None | None | None | N | None | 1.33615E-05 | 1.66822E-05 | None | 0 | 0 | None | 0 | 0 | 3.6456E-05 | 1.86715E-04 | 4.806E-05 |
R/W | rs766522121 | -0.413 | 1.0 | N | 0.678 | 0.425 | 0.398727352345 | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | N | None | 4.13E-05 | 0 | None | 9.69E-05 | 1.54623E-04 | None | 3.27E-05 | None | 0 | 0 | 0 |
R/W | rs766522121 | -0.413 | 1.0 | N | 0.678 | 0.425 | 0.398727352345 | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 1.68968E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/W | rs766522121 | -0.413 | 1.0 | N | 0.678 | 0.425 | 0.398727352345 | gnomAD-4.0.0 | 2.47961E-05 | None | None | None | None | N | None | 1.46929E-04 | 0 | None | 3.37998E-05 | 1.11692E-04 | None | 0 | 0 | 1.3565E-05 | 4.393E-05 | 4.80538E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5521 | ambiguous | 0.3783 | ambiguous | -0.017 | Destabilizing | 0.985 | D | 0.512 | neutral | None | None | None | None | N |
R/C | 0.277 | likely_benign | 0.185 | benign | -0.297 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
R/D | 0.7787 | likely_pathogenic | 0.626 | pathogenic | -0.127 | Destabilizing | 0.998 | D | 0.533 | neutral | None | None | None | None | N |
R/E | 0.5867 | likely_pathogenic | 0.4356 | ambiguous | -0.078 | Destabilizing | 0.985 | D | 0.525 | neutral | None | None | None | None | N |
R/F | 0.7175 | likely_pathogenic | 0.5691 | pathogenic | -0.306 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
R/G | 0.3823 | ambiguous | 0.2498 | benign | -0.175 | Destabilizing | 0.996 | D | 0.493 | neutral | N | 0.490062836 | None | None | N |
R/H | 0.1492 | likely_benign | 0.1103 | benign | -0.561 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
R/I | 0.4946 | ambiguous | 0.3765 | ambiguous | 0.353 | Stabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
R/K | 0.1467 | likely_benign | 0.1202 | benign | -0.139 | Destabilizing | 0.271 | N | 0.228 | neutral | None | None | None | None | N |
R/L | 0.3669 | ambiguous | 0.2565 | benign | 0.353 | Stabilizing | 0.996 | D | 0.493 | neutral | N | 0.504360285 | None | None | N |
R/M | 0.4775 | ambiguous | 0.3564 | ambiguous | -0.069 | Destabilizing | 1.0 | D | 0.578 | neutral | None | None | None | None | N |
R/N | 0.6738 | likely_pathogenic | 0.5218 | ambiguous | -0.019 | Destabilizing | 0.998 | D | 0.531 | neutral | None | None | None | None | N |
R/P | 0.478 | ambiguous | 0.2857 | benign | 0.248 | Stabilizing | 1.0 | D | 0.637 | neutral | N | 0.464071101 | None | None | N |
R/Q | 0.1648 | likely_benign | 0.1218 | benign | -0.093 | Destabilizing | 0.999 | D | 0.554 | neutral | N | 0.493836647 | None | None | N |
R/S | 0.6106 | likely_pathogenic | 0.4407 | ambiguous | -0.318 | Destabilizing | 0.985 | D | 0.534 | neutral | None | None | None | None | N |
R/T | 0.3755 | ambiguous | 0.2646 | benign | -0.152 | Destabilizing | 0.993 | D | 0.512 | neutral | None | None | None | None | N |
R/V | 0.5475 | ambiguous | 0.4007 | ambiguous | 0.248 | Stabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
R/W | 0.3083 | likely_benign | 0.2179 | benign | -0.418 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.496896233 | None | None | N |
R/Y | 0.5416 | ambiguous | 0.3987 | ambiguous | -0.007 | Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.