Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21719 | 65380;65381;65382 | chr2:178584396;178584395;178584394 | chr2:179449123;179449122;179449121 |
N2AB | 20078 | 60457;60458;60459 | chr2:178584396;178584395;178584394 | chr2:179449123;179449122;179449121 |
N2A | 19151 | 57676;57677;57678 | chr2:178584396;178584395;178584394 | chr2:179449123;179449122;179449121 |
N2B | 12654 | 38185;38186;38187 | chr2:178584396;178584395;178584394 | chr2:179449123;179449122;179449121 |
Novex-1 | 12779 | 38560;38561;38562 | chr2:178584396;178584395;178584394 | chr2:179449123;179449122;179449121 |
Novex-2 | 12846 | 38761;38762;38763 | chr2:178584396;178584395;178584394 | chr2:179449123;179449122;179449121 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs762352911 | -1.273 | 1.0 | N | 0.837 | 0.492 | 0.587632265475 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Y/C | rs762352911 | -1.273 | 1.0 | N | 0.837 | 0.492 | 0.587632265475 | gnomAD-4.0.0 | 6.36898E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14407E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9481 | likely_pathogenic | 0.9436 | pathogenic | -2.481 | Highly Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
Y/C | 0.7022 | likely_pathogenic | 0.6541 | pathogenic | -1.358 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.514713352 | None | None | N |
Y/D | 0.9781 | likely_pathogenic | 0.9767 | pathogenic | -2.432 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.52386526 | None | None | N |
Y/E | 0.9851 | likely_pathogenic | 0.9836 | pathogenic | -2.275 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Y/F | 0.1358 | likely_benign | 0.1212 | benign | -0.87 | Destabilizing | 0.999 | D | 0.489 | neutral | N | 0.473557376 | None | None | N |
Y/G | 0.9288 | likely_pathogenic | 0.9299 | pathogenic | -2.851 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Y/H | 0.777 | likely_pathogenic | 0.7589 | pathogenic | -1.374 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.480464273 | None | None | N |
Y/I | 0.8399 | likely_pathogenic | 0.8328 | pathogenic | -1.295 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
Y/K | 0.9685 | likely_pathogenic | 0.9646 | pathogenic | -1.891 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
Y/L | 0.7844 | likely_pathogenic | 0.761 | pathogenic | -1.295 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
Y/M | 0.8585 | likely_pathogenic | 0.8405 | pathogenic | -0.955 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
Y/N | 0.8571 | likely_pathogenic | 0.8501 | pathogenic | -2.565 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | D | 0.52361177 | None | None | N |
Y/P | 0.9973 | likely_pathogenic | 0.9974 | pathogenic | -1.696 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Y/Q | 0.9623 | likely_pathogenic | 0.9554 | pathogenic | -2.364 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Y/R | 0.9597 | likely_pathogenic | 0.953 | pathogenic | -1.604 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/S | 0.897 | likely_pathogenic | 0.8912 | pathogenic | -2.915 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | D | 0.523358281 | None | None | N |
Y/T | 0.9505 | likely_pathogenic | 0.9473 | pathogenic | -2.65 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Y/V | 0.8102 | likely_pathogenic | 0.7927 | pathogenic | -1.696 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
Y/W | 0.7734 | likely_pathogenic | 0.7501 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.