Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2172565398;65399;65400 chr2:178584378;178584377;178584376chr2:179449105;179449104;179449103
N2AB2008460475;60476;60477 chr2:178584378;178584377;178584376chr2:179449105;179449104;179449103
N2A1915757694;57695;57696 chr2:178584378;178584377;178584376chr2:179449105;179449104;179449103
N2B1266038203;38204;38205 chr2:178584378;178584377;178584376chr2:179449105;179449104;179449103
Novex-11278538578;38579;38580 chr2:178584378;178584377;178584376chr2:179449105;179449104;179449103
Novex-21285238779;38780;38781 chr2:178584378;178584377;178584376chr2:179449105;179449104;179449103
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTA
  • RefSeq wild type template codon: CAT
  • Domain: Fn3-45
  • Domain position: 67
  • Structural Position: 98
  • Q(SASA): 0.4029
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/A rs543828787 -1.257 0.334 N 0.357 0.223 0.545173277474 gnomAD-2.1.1 1.20937E-04 None None None None N None 0 0 None 0 0 None 9.81033E-04 None 0 0 0
V/A rs543828787 -1.257 0.334 N 0.357 0.223 0.545173277474 gnomAD-3.1.2 2.63E-05 None None None None N None 0 0 0 0 0 None 0 0 0 8.28844E-04 0
V/A rs543828787 -1.257 0.334 N 0.357 0.223 0.545173277474 1000 genomes 1.99681E-04 None None None None N None 0 0 None None 0 0 None None None 1E-03 None
V/A rs543828787 -1.257 0.334 N 0.357 0.223 0.545173277474 gnomAD-4.0.0 6.07453E-05 None None None None N None 0 0 None 0 0 None 0 0 0 9.88598E-04 1.2809E-04
V/I rs368716894 -0.395 0.002 N 0.104 0.085 None gnomAD-2.1.1 2.86E-05 None None None None N None 4.13E-05 0 None 0 0 None 0 None 0 5.49E-05 0
V/I rs368716894 -0.395 0.002 N 0.104 0.085 None gnomAD-3.1.2 3.95E-05 None None None None N None 2.41E-05 0 0 0 0 None 0 0 7.35E-05 0 0
V/I rs368716894 -0.395 0.002 N 0.104 0.085 None gnomAD-4.0.0 7.19086E-05 None None None None N None 2.67051E-05 0 None 0 0 None 0 0 8.98701E-05 0 1.28135E-04
V/L rs368716894 None 0.036 N 0.231 0.05 0.211220785272 gnomAD-4.0.0 3.4221E-06 None None None None N None 0 0 None 0 0 None 0 0 4.49844E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.2375 likely_benign 0.1845 benign -0.928 Destabilizing 0.334 N 0.357 neutral N 0.483078149 None None N
V/C 0.7583 likely_pathogenic 0.6736 pathogenic -0.903 Destabilizing 0.992 D 0.439 neutral None None None None N
V/D 0.6356 likely_pathogenic 0.485 ambiguous -0.411 Destabilizing 0.972 D 0.499 neutral None None None None N
V/E 0.468 ambiguous 0.3548 ambiguous -0.44 Destabilizing 0.963 D 0.464 neutral N 0.439593944 None None N
V/F 0.2636 likely_benign 0.1982 benign -0.715 Destabilizing 0.85 D 0.418 neutral None None None None N
V/G 0.3741 ambiguous 0.3004 benign -1.177 Destabilizing 0.896 D 0.447 neutral N 0.474989636 None None N
V/H 0.7071 likely_pathogenic 0.5678 pathogenic -0.492 Destabilizing 0.992 D 0.489 neutral None None None None N
V/I 0.0785 likely_benign 0.0712 benign -0.377 Destabilizing 0.002 N 0.104 neutral N 0.368216635 None None N
V/K 0.5799 likely_pathogenic 0.4376 ambiguous -0.777 Destabilizing 0.92 D 0.441 neutral None None None None N
V/L 0.1722 likely_benign 0.1421 benign -0.377 Destabilizing 0.036 N 0.231 neutral N 0.428859662 None None N
V/M 0.1402 likely_benign 0.1198 benign -0.517 Destabilizing 0.059 N 0.215 neutral None None None None N
V/N 0.4177 ambiguous 0.3029 benign -0.642 Destabilizing 0.972 D 0.491 neutral None None None None N
V/P 0.7446 likely_pathogenic 0.5768 pathogenic -0.525 Destabilizing 0.972 D 0.481 neutral None None None None N
V/Q 0.4058 ambiguous 0.3164 benign -0.781 Destabilizing 0.92 D 0.476 neutral None None None None N
V/R 0.4857 ambiguous 0.3353 benign -0.273 Destabilizing 0.92 D 0.493 neutral None None None None N
V/S 0.2976 likely_benign 0.2239 benign -1.154 Destabilizing 0.92 D 0.417 neutral None None None None N
V/T 0.1936 likely_benign 0.1516 benign -1.061 Destabilizing 0.617 D 0.324 neutral None None None None N
V/W 0.8456 likely_pathogenic 0.7538 pathogenic -0.818 Destabilizing 0.992 D 0.552 neutral None None None None N
V/Y 0.6781 likely_pathogenic 0.5452 ambiguous -0.531 Destabilizing 0.92 D 0.449 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.