Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21733 | 65422;65423;65424 | chr2:178584354;178584353;178584352 | chr2:179449081;179449080;179449079 |
N2AB | 20092 | 60499;60500;60501 | chr2:178584354;178584353;178584352 | chr2:179449081;179449080;179449079 |
N2A | 19165 | 57718;57719;57720 | chr2:178584354;178584353;178584352 | chr2:179449081;179449080;179449079 |
N2B | 12668 | 38227;38228;38229 | chr2:178584354;178584353;178584352 | chr2:179449081;179449080;179449079 |
Novex-1 | 12793 | 38602;38603;38604 | chr2:178584354;178584353;178584352 | chr2:179449081;179449080;179449079 |
Novex-2 | 12860 | 38803;38804;38805 | chr2:178584354;178584353;178584352 | chr2:179449081;179449080;179449079 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.822 | D | 0.582 | 0.513 | 0.614227455099 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/I | None | None | 0.971 | D | 0.726 | 0.479 | 0.774314364548 | gnomAD-4.0.0 | 2.73851E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69984E-06 | 0 | 1.65772E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9905 | likely_pathogenic | 0.9921 | pathogenic | -2.105 | Highly Destabilizing | 0.754 | D | 0.55 | neutral | None | None | None | None | N |
R/C | 0.6806 | likely_pathogenic | 0.7502 | pathogenic | -1.851 | Destabilizing | 0.998 | D | 0.722 | prob.delet. | None | None | None | None | N |
R/D | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -1.239 | Destabilizing | 0.956 | D | 0.632 | neutral | None | None | None | None | N |
R/E | 0.9876 | likely_pathogenic | 0.9889 | pathogenic | -1.008 | Destabilizing | 0.754 | D | 0.533 | neutral | None | None | None | None | N |
R/F | 0.993 | likely_pathogenic | 0.9953 | pathogenic | -1.19 | Destabilizing | 0.993 | D | 0.741 | deleterious | None | None | None | None | N |
R/G | 0.9876 | likely_pathogenic | 0.9891 | pathogenic | -2.44 | Highly Destabilizing | 0.822 | D | 0.582 | neutral | D | 0.544932029 | None | None | N |
R/H | 0.5738 | likely_pathogenic | 0.5907 | pathogenic | -2.131 | Highly Destabilizing | 0.978 | D | 0.593 | neutral | None | None | None | None | N |
R/I | 0.9724 | likely_pathogenic | 0.9816 | pathogenic | -1.113 | Destabilizing | 0.971 | D | 0.726 | prob.delet. | D | 0.526827774 | None | None | N |
R/K | 0.582 | likely_pathogenic | 0.6257 | pathogenic | -1.151 | Destabilizing | 0.014 | N | 0.303 | neutral | N | 0.480589177 | None | None | N |
R/L | 0.9517 | likely_pathogenic | 0.96 | pathogenic | -1.113 | Destabilizing | 0.86 | D | 0.582 | neutral | None | None | None | None | N |
R/M | 0.9784 | likely_pathogenic | 0.9866 | pathogenic | -1.615 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
R/N | 0.9943 | likely_pathogenic | 0.9948 | pathogenic | -1.412 | Destabilizing | 0.956 | D | 0.528 | neutral | None | None | None | None | N |
R/P | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -1.436 | Destabilizing | 0.978 | D | 0.663 | neutral | None | None | None | None | N |
R/Q | 0.6019 | likely_pathogenic | 0.6372 | pathogenic | -1.196 | Destabilizing | 0.915 | D | 0.53 | neutral | None | None | None | None | N |
R/S | 0.993 | likely_pathogenic | 0.9941 | pathogenic | -2.225 | Highly Destabilizing | 0.698 | D | 0.541 | neutral | N | 0.509707343 | None | None | N |
R/T | 0.9893 | likely_pathogenic | 0.992 | pathogenic | -1.785 | Destabilizing | 0.942 | D | 0.565 | neutral | N | 0.497959417 | None | None | N |
R/V | 0.976 | likely_pathogenic | 0.9827 | pathogenic | -1.436 | Destabilizing | 0.956 | D | 0.695 | prob.neutral | None | None | None | None | N |
R/W | 0.9037 | likely_pathogenic | 0.9248 | pathogenic | -0.744 | Destabilizing | 0.998 | D | 0.675 | neutral | None | None | None | None | N |
R/Y | 0.9709 | likely_pathogenic | 0.9808 | pathogenic | -0.654 | Destabilizing | 0.993 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.