Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21734 | 65425;65426;65427 | chr2:178584351;178584350;178584349 | chr2:179449078;179449077;179449076 |
N2AB | 20093 | 60502;60503;60504 | chr2:178584351;178584350;178584349 | chr2:179449078;179449077;179449076 |
N2A | 19166 | 57721;57722;57723 | chr2:178584351;178584350;178584349 | chr2:179449078;179449077;179449076 |
N2B | 12669 | 38230;38231;38232 | chr2:178584351;178584350;178584349 | chr2:179449078;179449077;179449076 |
Novex-1 | 12794 | 38605;38606;38607 | chr2:178584351;178584350;178584349 | chr2:179449078;179449077;179449076 |
Novex-2 | 12861 | 38806;38807;38808 | chr2:178584351;178584350;178584349 | chr2:179449078;179449077;179449076 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs765344234 | -2.035 | 0.994 | N | 0.616 | 0.378 | 0.492267288202 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
I/M | rs765344234 | -2.035 | 0.994 | N | 0.616 | 0.378 | 0.492267288202 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs765344234 | -2.035 | 0.994 | N | 0.616 | 0.378 | 0.492267288202 | gnomAD-4.0.0 | 2.4807E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39288E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9067 | likely_pathogenic | 0.8364 | pathogenic | -2.99 | Highly Destabilizing | 0.931 | D | 0.539 | neutral | None | None | None | None | N |
I/C | 0.9148 | likely_pathogenic | 0.8767 | pathogenic | -1.907 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
I/D | 0.9987 | likely_pathogenic | 0.9978 | pathogenic | -3.497 | Highly Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
I/E | 0.9969 | likely_pathogenic | 0.9955 | pathogenic | -3.172 | Highly Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
I/F | 0.7843 | likely_pathogenic | 0.7509 | pathogenic | -1.719 | Destabilizing | 0.994 | D | 0.612 | neutral | N | 0.493176931 | None | None | N |
I/G | 0.9899 | likely_pathogenic | 0.9812 | pathogenic | -3.589 | Highly Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
I/H | 0.9965 | likely_pathogenic | 0.9942 | pathogenic | -3.172 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
I/K | 0.9948 | likely_pathogenic | 0.9928 | pathogenic | -2.114 | Highly Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
I/L | 0.4401 | ambiguous | 0.3761 | ambiguous | -1.171 | Destabilizing | 0.689 | D | 0.305 | neutral | N | 0.483080936 | None | None | N |
I/M | 0.4779 | ambiguous | 0.4028 | ambiguous | -1.329 | Destabilizing | 0.994 | D | 0.616 | neutral | N | 0.507846095 | None | None | N |
I/N | 0.9719 | likely_pathogenic | 0.9597 | pathogenic | -2.815 | Highly Destabilizing | 0.998 | D | 0.812 | deleterious | N | 0.4939374 | None | None | N |
I/P | 0.9922 | likely_pathogenic | 0.9873 | pathogenic | -1.771 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
I/Q | 0.9946 | likely_pathogenic | 0.9921 | pathogenic | -2.461 | Highly Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
I/R | 0.9922 | likely_pathogenic | 0.9891 | pathogenic | -2.164 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
I/S | 0.9542 | likely_pathogenic | 0.9275 | pathogenic | -3.347 | Highly Destabilizing | 0.994 | D | 0.698 | prob.neutral | N | 0.482581095 | None | None | N |
I/T | 0.8841 | likely_pathogenic | 0.8318 | pathogenic | -2.863 | Highly Destabilizing | 0.961 | D | 0.45 | neutral | N | 0.475579656 | None | None | N |
I/V | 0.1275 | likely_benign | 0.1025 | benign | -1.771 | Destabilizing | 0.044 | N | 0.183 | neutral | N | 0.320347251 | None | None | N |
I/W | 0.9978 | likely_pathogenic | 0.997 | pathogenic | -2.057 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
I/Y | 0.981 | likely_pathogenic | 0.9776 | pathogenic | -1.922 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.