Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21737 | 65434;65435;65436 | chr2:178584342;178584341;178584340 | chr2:179449069;179449068;179449067 |
N2AB | 20096 | 60511;60512;60513 | chr2:178584342;178584341;178584340 | chr2:179449069;179449068;179449067 |
N2A | 19169 | 57730;57731;57732 | chr2:178584342;178584341;178584340 | chr2:179449069;179449068;179449067 |
N2B | 12672 | 38239;38240;38241 | chr2:178584342;178584341;178584340 | chr2:179449069;179449068;179449067 |
Novex-1 | 12797 | 38614;38615;38616 | chr2:178584342;178584341;178584340 | chr2:179449069;179449068;179449067 |
Novex-2 | 12864 | 38815;38816;38817 | chr2:178584342;178584341;178584340 | chr2:179449069;179449068;179449067 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs2048461875 | None | 0.619 | N | 0.335 | 0.126 | 0.224531998449 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3501 | ambiguous | 0.2902 | benign | -2.204 | Highly Destabilizing | 0.994 | D | 0.569 | neutral | None | None | None | None | N |
L/C | 0.3965 | ambiguous | 0.3634 | ambiguous | -1.633 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/D | 0.8908 | likely_pathogenic | 0.8485 | pathogenic | -1.704 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/E | 0.4186 | ambiguous | 0.3675 | ambiguous | -1.56 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/F | 0.1558 | likely_benign | 0.1405 | benign | -1.354 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/G | 0.8095 | likely_pathogenic | 0.7475 | pathogenic | -2.663 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/H | 0.2679 | likely_benign | 0.2268 | benign | -1.888 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/I | 0.0667 | likely_benign | 0.0655 | benign | -0.929 | Destabilizing | 0.984 | D | 0.453 | neutral | N | 0.390285418 | None | None | N |
L/K | 0.3188 | likely_benign | 0.2785 | benign | -1.41 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/M | 0.0854 | likely_benign | 0.0838 | benign | -0.953 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
L/N | 0.5967 | likely_pathogenic | 0.5006 | ambiguous | -1.497 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/P | 0.9853 | likely_pathogenic | 0.9827 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.523466121 | None | None | N |
L/Q | 0.1301 | likely_benign | 0.1221 | benign | -1.492 | Destabilizing | 1.0 | D | 0.868 | deleterious | N | 0.453123388 | None | None | N |
L/R | 0.2609 | likely_benign | 0.2245 | benign | -1.052 | Destabilizing | 1.0 | D | 0.871 | deleterious | N | 0.459259927 | None | None | N |
L/S | 0.4041 | ambiguous | 0.3295 | benign | -2.3 | Highly Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
L/T | 0.2307 | likely_benign | 0.1941 | benign | -2.02 | Highly Destabilizing | 0.998 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/V | 0.0603 | likely_benign | 0.0605 | benign | -1.329 | Destabilizing | 0.619 | D | 0.335 | neutral | N | 0.331154183 | None | None | N |
L/W | 0.3114 | likely_benign | 0.2787 | benign | -1.53 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/Y | 0.3724 | ambiguous | 0.3273 | benign | -1.272 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.