Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21750 | 65473;65474;65475 | chr2:178584303;178584302;178584301 | chr2:179449030;179449029;179449028 |
N2AB | 20109 | 60550;60551;60552 | chr2:178584303;178584302;178584301 | chr2:179449030;179449029;179449028 |
N2A | 19182 | 57769;57770;57771 | chr2:178584303;178584302;178584301 | chr2:179449030;179449029;179449028 |
N2B | 12685 | 38278;38279;38280 | chr2:178584303;178584302;178584301 | chr2:179449030;179449029;179449028 |
Novex-1 | 12810 | 38653;38654;38655 | chr2:178584303;178584302;178584301 | chr2:179449030;179449029;179449028 |
Novex-2 | 12877 | 38854;38855;38856 | chr2:178584303;178584302;178584301 | chr2:179449030;179449029;179449028 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs761034547 | 0.185 | 0.799 | N | 0.579 | 0.229 | 0.300110245524 | gnomAD-2.1.1 | 4.24E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.58E-05 | None | 0 | 0 | 0 |
E/A | rs761034547 | 0.185 | 0.799 | N | 0.579 | 0.229 | 0.300110245524 | gnomAD-4.0.0 | 1.64996E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.49522E-05 | 0 |
E/K | None | None | 0.799 | N | 0.617 | 0.234 | 0.278143212241 | gnomAD-4.0.0 | 6.59988E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.92692E-06 | 1.4958E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1743 | likely_benign | 0.141 | benign | -0.247 | Destabilizing | 0.799 | D | 0.579 | neutral | N | 0.469844166 | None | None | N |
E/C | 0.8949 | likely_pathogenic | 0.8398 | pathogenic | -0.223 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
E/D | 0.1023 | likely_benign | 0.0843 | benign | -0.258 | Destabilizing | 0.002 | N | 0.168 | neutral | N | 0.480440489 | None | None | N |
E/F | 0.897 | likely_pathogenic | 0.842 | pathogenic | -0.067 | Destabilizing | 0.991 | D | 0.731 | deleterious | None | None | None | None | N |
E/G | 0.2251 | likely_benign | 0.1673 | benign | -0.407 | Destabilizing | 0.799 | D | 0.577 | neutral | N | 0.476213722 | None | None | N |
E/H | 0.6467 | likely_pathogenic | 0.5535 | ambiguous | 0.451 | Stabilizing | 0.991 | D | 0.588 | neutral | None | None | None | None | N |
E/I | 0.541 | ambiguous | 0.4456 | ambiguous | 0.133 | Stabilizing | 0.974 | D | 0.741 | deleterious | None | None | None | None | N |
E/K | 0.2844 | likely_benign | 0.2173 | benign | 0.406 | Stabilizing | 0.799 | D | 0.617 | neutral | N | 0.470858124 | None | None | N |
E/L | 0.5844 | likely_pathogenic | 0.4971 | ambiguous | 0.133 | Stabilizing | 0.974 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/M | 0.6563 | likely_pathogenic | 0.5662 | pathogenic | 0.013 | Stabilizing | 0.998 | D | 0.748 | deleterious | None | None | None | None | N |
E/N | 0.2872 | likely_benign | 0.2154 | benign | -0.042 | Destabilizing | 0.725 | D | 0.604 | neutral | None | None | None | None | N |
E/P | 0.3673 | ambiguous | 0.3126 | benign | 0.025 | Stabilizing | 0.974 | D | 0.616 | neutral | None | None | None | None | N |
E/Q | 0.2137 | likely_benign | 0.1797 | benign | 0.018 | Stabilizing | 0.89 | D | 0.609 | neutral | N | 0.472655323 | None | None | N |
E/R | 0.4212 | ambiguous | 0.3349 | benign | 0.677 | Stabilizing | 0.974 | D | 0.627 | neutral | None | None | None | None | N |
E/S | 0.2263 | likely_benign | 0.1768 | benign | -0.157 | Destabilizing | 0.841 | D | 0.583 | neutral | None | None | None | None | N |
E/T | 0.2994 | likely_benign | 0.2359 | benign | -0.009 | Destabilizing | 0.841 | D | 0.606 | neutral | None | None | None | None | N |
E/V | 0.3369 | likely_benign | 0.2708 | benign | 0.025 | Stabilizing | 0.966 | D | 0.659 | prob.neutral | N | 0.481592092 | None | None | N |
E/W | 0.9594 | likely_pathogenic | 0.9287 | pathogenic | 0.079 | Stabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
E/Y | 0.7901 | likely_pathogenic | 0.6892 | pathogenic | 0.174 | Stabilizing | 0.991 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.