Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21753 | 65482;65483;65484 | chr2:178584294;178584293;178584292 | chr2:179449021;179449020;179449019 |
N2AB | 20112 | 60559;60560;60561 | chr2:178584294;178584293;178584292 | chr2:179449021;179449020;179449019 |
N2A | 19185 | 57778;57779;57780 | chr2:178584294;178584293;178584292 | chr2:179449021;179449020;179449019 |
N2B | 12688 | 38287;38288;38289 | chr2:178584294;178584293;178584292 | chr2:179449021;179449020;179449019 |
Novex-1 | 12813 | 38662;38663;38664 | chr2:178584294;178584293;178584292 | chr2:179449021;179449020;179449019 |
Novex-2 | 12880 | 38863;38864;38865 | chr2:178584294;178584293;178584292 | chr2:179449021;179449020;179449019 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs748999109 | 0.021 | 0.999 | N | 0.797 | 0.377 | 0.541875726618 | gnomAD-2.1.1 | 9.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.167E-04 | None | 0 | None | 0 | 0 | 0 |
T/I | rs748999109 | 0.021 | 0.999 | N | 0.797 | 0.377 | 0.541875726618 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9425E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs748999109 | 0.021 | 0.999 | N | 0.797 | 0.377 | 0.541875726618 | gnomAD-4.0.0 | 4.07279E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.3928E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1041 | likely_benign | 0.1026 | benign | -0.723 | Destabilizing | 0.997 | D | 0.731 | deleterious | N | 0.487953612 | None | None | N |
T/C | 0.4651 | ambiguous | 0.4209 | ambiguous | -0.511 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
T/D | 0.8398 | likely_pathogenic | 0.7596 | pathogenic | -0.07 | Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | N |
T/E | 0.6687 | likely_pathogenic | 0.5781 | pathogenic | -0.079 | Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
T/F | 0.4283 | ambiguous | 0.3381 | benign | -0.828 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
T/G | 0.5306 | ambiguous | 0.4874 | ambiguous | -0.968 | Destabilizing | 0.999 | D | 0.661 | prob.neutral | None | None | None | None | N |
T/H | 0.5505 | ambiguous | 0.4663 | ambiguous | -1.223 | Destabilizing | 1.0 | D | 0.735 | deleterious | None | None | None | None | N |
T/I | 0.2244 | likely_benign | 0.1803 | benign | -0.169 | Destabilizing | 0.999 | D | 0.797 | deleterious | N | 0.490396484 | None | None | N |
T/K | 0.5279 | ambiguous | 0.4338 | ambiguous | -0.67 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
T/L | 0.1245 | likely_benign | 0.1074 | benign | -0.169 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
T/M | 0.1005 | likely_benign | 0.0909 | benign | 0.055 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
T/N | 0.3393 | likely_benign | 0.2853 | benign | -0.595 | Destabilizing | 0.999 | D | 0.758 | deleterious | N | 0.492028524 | None | None | N |
T/P | 0.1594 | likely_benign | 0.1566 | benign | -0.321 | Destabilizing | 0.999 | D | 0.788 | deleterious | N | 0.476379804 | None | None | N |
T/Q | 0.4404 | ambiguous | 0.375 | ambiguous | -0.767 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
T/R | 0.4505 | ambiguous | 0.3498 | ambiguous | -0.426 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
T/S | 0.2472 | likely_benign | 0.2184 | benign | -0.889 | Destabilizing | 0.997 | D | 0.768 | deleterious | D | 0.526645286 | None | None | N |
T/V | 0.1459 | likely_benign | 0.1254 | benign | -0.321 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
T/W | 0.7932 | likely_pathogenic | 0.7047 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
T/Y | 0.4933 | ambiguous | 0.409 | ambiguous | -0.519 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.