Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21756 | 65491;65492;65493 | chr2:178584285;178584284;178584283 | chr2:179449012;179449011;179449010 |
N2AB | 20115 | 60568;60569;60570 | chr2:178584285;178584284;178584283 | chr2:179449012;179449011;179449010 |
N2A | 19188 | 57787;57788;57789 | chr2:178584285;178584284;178584283 | chr2:179449012;179449011;179449010 |
N2B | 12691 | 38296;38297;38298 | chr2:178584285;178584284;178584283 | chr2:179449012;179449011;179449010 |
Novex-1 | 12816 | 38671;38672;38673 | chr2:178584285;178584284;178584283 | chr2:179449012;179449011;179449010 |
Novex-2 | 12883 | 38872;38873;38874 | chr2:178584285;178584284;178584283 | chr2:179449012;179449011;179449010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | 0.006 | N | 0.275 | 0.042 | 0.383760037723 | gnomAD-4.0.0 | 7.13598E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.23825E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3293 | likely_benign | 0.2171 | benign | -0.552 | Destabilizing | None | N | 0.085 | neutral | None | None | None | None | N |
M/C | 0.7595 | likely_pathogenic | 0.6387 | pathogenic | -0.434 | Destabilizing | 0.204 | N | 0.271 | neutral | None | None | None | None | N |
M/D | 0.7073 | likely_pathogenic | 0.5432 | ambiguous | 0.088 | Stabilizing | 0.035 | N | 0.363 | neutral | None | None | None | None | N |
M/E | 0.523 | ambiguous | 0.3817 | ambiguous | 0.034 | Stabilizing | 0.015 | N | 0.163 | neutral | None | None | None | None | N |
M/F | 0.4813 | ambiguous | 0.3525 | ambiguous | -0.203 | Destabilizing | 0.068 | N | 0.259 | neutral | None | None | None | None | N |
M/G | 0.6258 | likely_pathogenic | 0.4566 | ambiguous | -0.722 | Destabilizing | 0.007 | N | 0.227 | neutral | None | None | None | None | N |
M/H | 0.5902 | likely_pathogenic | 0.4279 | ambiguous | 0.105 | Stabilizing | 0.439 | N | 0.287 | neutral | None | None | None | None | N |
M/I | 0.454 | ambiguous | 0.3198 | benign | -0.192 | Destabilizing | 0.006 | N | 0.275 | neutral | N | 0.443874761 | None | None | N |
M/K | 0.4615 | ambiguous | 0.2814 | benign | 0.234 | Stabilizing | 0.011 | N | 0.24 | neutral | N | 0.409164754 | None | None | N |
M/L | 0.163 | likely_benign | 0.1204 | benign | -0.192 | Destabilizing | 0.001 | N | 0.127 | neutral | N | 0.398947761 | None | None | N |
M/N | 0.3287 | likely_benign | 0.2301 | benign | 0.402 | Stabilizing | 0.035 | N | 0.314 | neutral | None | None | None | None | N |
M/P | 0.6047 | likely_pathogenic | 0.4098 | ambiguous | -0.284 | Destabilizing | 0.068 | N | 0.395 | neutral | None | None | None | None | N |
M/Q | 0.3151 | likely_benign | 0.2227 | benign | 0.222 | Stabilizing | 0.068 | N | 0.265 | neutral | None | None | None | None | N |
M/R | 0.5122 | ambiguous | 0.3121 | benign | 0.776 | Stabilizing | 0.026 | N | 0.388 | neutral | N | 0.410031546 | None | None | N |
M/S | 0.2729 | likely_benign | 0.19 | benign | -0.027 | Destabilizing | 0.001 | N | 0.077 | neutral | None | None | None | None | N |
M/T | 0.1907 | likely_benign | 0.1372 | benign | 0.016 | Stabilizing | None | N | 0.079 | neutral | N | 0.346441427 | None | None | N |
M/V | 0.1544 | likely_benign | 0.1159 | benign | -0.284 | Destabilizing | 0.002 | N | 0.121 | neutral | N | 0.404449581 | None | None | N |
M/W | 0.8 | likely_pathogenic | 0.6608 | pathogenic | -0.174 | Destabilizing | 0.747 | D | 0.293 | neutral | None | None | None | None | N |
M/Y | 0.6092 | likely_pathogenic | 0.4643 | ambiguous | -0.048 | Destabilizing | 0.204 | N | 0.364 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.