Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21769 | 65530;65531;65532 | chr2:178583877;178583876;178583875 | chr2:179448604;179448603;179448602 |
N2AB | 20128 | 60607;60608;60609 | chr2:178583877;178583876;178583875 | chr2:179448604;179448603;179448602 |
N2A | 19201 | 57826;57827;57828 | chr2:178583877;178583876;178583875 | chr2:179448604;179448603;179448602 |
N2B | 12704 | 38335;38336;38337 | chr2:178583877;178583876;178583875 | chr2:179448604;179448603;179448602 |
Novex-1 | 12829 | 38710;38711;38712 | chr2:178583877;178583876;178583875 | chr2:179448604;179448603;179448602 |
Novex-2 | 12896 | 38911;38912;38913 | chr2:178583877;178583876;178583875 | chr2:179448604;179448603;179448602 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1426502571 | -0.749 | 0.004 | N | 0.241 | 0.078 | 0.364926071151 | gnomAD-2.1.1 | 4.35E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.93E-05 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1426502571 | -0.749 | 0.004 | N | 0.241 | 0.078 | 0.364926071151 | gnomAD-4.0.0 | 1.64784E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.83094E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4264 | ambiguous | 0.3814 | ambiguous | -1.418 | Destabilizing | 0.581 | D | 0.473 | neutral | N | 0.516001431 | None | None | N |
V/C | 0.8179 | likely_pathogenic | 0.7887 | pathogenic | -1.472 | Destabilizing | 0.993 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.8738 | likely_pathogenic | 0.8507 | pathogenic | -1.292 | Destabilizing | 0.908 | D | 0.868 | deleterious | N | 0.509911607 | None | None | N |
V/E | 0.7275 | likely_pathogenic | 0.6809 | pathogenic | -1.29 | Destabilizing | 0.929 | D | 0.833 | deleterious | None | None | None | None | N |
V/F | 0.4756 | ambiguous | 0.4099 | ambiguous | -1.289 | Destabilizing | 0.83 | D | 0.796 | deleterious | N | 0.484681008 | None | None | N |
V/G | 0.6118 | likely_pathogenic | 0.6051 | pathogenic | -1.707 | Destabilizing | 0.908 | D | 0.845 | deleterious | N | 0.48804837 | None | None | N |
V/H | 0.8731 | likely_pathogenic | 0.8404 | pathogenic | -1.258 | Destabilizing | 0.993 | D | 0.856 | deleterious | None | None | None | None | N |
V/I | 0.08 | likely_benign | 0.0657 | benign | -0.726 | Destabilizing | 0.004 | N | 0.241 | neutral | N | 0.469399563 | None | None | N |
V/K | 0.5785 | likely_pathogenic | 0.5568 | ambiguous | -1.007 | Destabilizing | 0.929 | D | 0.837 | deleterious | None | None | None | None | N |
V/L | 0.4891 | ambiguous | 0.3962 | ambiguous | -0.726 | Destabilizing | 0.09 | N | 0.358 | neutral | N | 0.469459908 | None | None | N |
V/M | 0.2666 | likely_benign | 0.2201 | benign | -0.824 | Destabilizing | 0.866 | D | 0.7 | prob.neutral | None | None | None | None | N |
V/N | 0.7196 | likely_pathogenic | 0.638 | pathogenic | -0.91 | Destabilizing | 0.976 | D | 0.866 | deleterious | None | None | None | None | N |
V/P | 0.9795 | likely_pathogenic | 0.979 | pathogenic | -0.923 | Destabilizing | 0.976 | D | 0.859 | deleterious | None | None | None | None | N |
V/Q | 0.6317 | likely_pathogenic | 0.5917 | pathogenic | -1.11 | Destabilizing | 0.976 | D | 0.851 | deleterious | None | None | None | None | N |
V/R | 0.5317 | ambiguous | 0.5103 | ambiguous | -0.602 | Destabilizing | 0.929 | D | 0.865 | deleterious | None | None | None | None | N |
V/S | 0.5481 | ambiguous | 0.4951 | ambiguous | -1.474 | Destabilizing | 0.929 | D | 0.826 | deleterious | None | None | None | None | N |
V/T | 0.3491 | ambiguous | 0.2882 | benign | -1.358 | Destabilizing | 0.648 | D | 0.58 | neutral | None | None | None | None | N |
V/W | 0.9561 | likely_pathogenic | 0.9499 | pathogenic | -1.403 | Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | N |
V/Y | 0.827 | likely_pathogenic | 0.7905 | pathogenic | -1.066 | Destabilizing | 0.929 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.