Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2177 | 6754;6755;6756 | chr2:178775182;178775181;178775180 | chr2:179639909;179639908;179639907 |
N2AB | 2177 | 6754;6755;6756 | chr2:178775182;178775181;178775180 | chr2:179639909;179639908;179639907 |
N2A | 2177 | 6754;6755;6756 | chr2:178775182;178775181;178775180 | chr2:179639909;179639908;179639907 |
N2B | 2131 | 6616;6617;6618 | chr2:178775182;178775181;178775180 | chr2:179639909;179639908;179639907 |
Novex-1 | 2131 | 6616;6617;6618 | chr2:178775182;178775181;178775180 | chr2:179639909;179639908;179639907 |
Novex-2 | 2131 | 6616;6617;6618 | chr2:178775182;178775181;178775180 | chr2:179639909;179639908;179639907 |
Novex-3 | 2177 | 6754;6755;6756 | chr2:178775182;178775181;178775180 | chr2:179639909;179639908;179639907 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.018 | N | 0.266 | 0.298 | 0.405700215632 | gnomAD-4.0.0 | 2.05244E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79866E-06 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1189 | likely_benign | 0.1236 | benign | -0.783 | Destabilizing | 0.856 | D | 0.423 | neutral | D | 0.574332437 | None | None | N |
T/C | 0.5152 | ambiguous | 0.5365 | ambiguous | -0.419 | Destabilizing | 0.998 | D | 0.607 | neutral | None | None | None | None | N |
T/D | 0.5125 | ambiguous | 0.5436 | ambiguous | -0.258 | Destabilizing | 0.994 | D | 0.643 | neutral | None | None | None | None | N |
T/E | 0.3737 | ambiguous | 0.4024 | ambiguous | -0.301 | Destabilizing | 0.994 | D | 0.639 | neutral | None | None | None | None | N |
T/F | 0.2555 | likely_benign | 0.2727 | benign | -1.07 | Destabilizing | 0.965 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/G | 0.3181 | likely_benign | 0.3279 | benign | -0.979 | Destabilizing | 0.994 | D | 0.642 | neutral | None | None | None | None | N |
T/H | 0.2629 | likely_benign | 0.2829 | benign | -1.266 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/I | 0.1141 | likely_benign | 0.1234 | benign | -0.363 | Destabilizing | 0.018 | N | 0.266 | neutral | N | 0.505351467 | None | None | N |
T/K | 0.2212 | likely_benign | 0.2428 | benign | -0.627 | Destabilizing | 0.977 | D | 0.645 | neutral | N | 0.503210427 | None | None | N |
T/L | 0.0845 | likely_benign | 0.0895 | benign | -0.363 | Destabilizing | 0.62 | D | 0.465 | neutral | None | None | None | None | N |
T/M | 0.0974 | likely_benign | 0.099 | benign | 0.082 | Stabilizing | 0.991 | D | 0.616 | neutral | None | None | None | None | N |
T/N | 0.1421 | likely_benign | 0.1499 | benign | -0.48 | Destabilizing | 0.994 | D | 0.585 | neutral | None | None | None | None | N |
T/P | 0.3099 | likely_benign | 0.3289 | benign | -0.473 | Destabilizing | 0.992 | D | 0.625 | neutral | D | 0.681598655 | None | None | N |
T/Q | 0.2294 | likely_benign | 0.2437 | benign | -0.774 | Destabilizing | 0.994 | D | 0.627 | neutral | None | None | None | None | N |
T/R | 0.1893 | likely_benign | 0.2095 | benign | -0.268 | Destabilizing | 0.992 | D | 0.617 | neutral | N | 0.504336304 | None | None | N |
T/S | 0.1192 | likely_benign | 0.1211 | benign | -0.751 | Destabilizing | 0.924 | D | 0.417 | neutral | D | 0.534028764 | None | None | N |
T/V | 0.121 | likely_benign | 0.1262 | benign | -0.473 | Destabilizing | 0.62 | D | 0.391 | neutral | None | None | None | None | N |
T/W | 0.6794 | likely_pathogenic | 0.707 | pathogenic | -0.967 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/Y | 0.3676 | ambiguous | 0.3936 | ambiguous | -0.737 | Destabilizing | 0.994 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.