Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21770 | 65533;65534;65535 | chr2:178583874;178583873;178583872 | chr2:179448601;179448600;179448599 |
N2AB | 20129 | 60610;60611;60612 | chr2:178583874;178583873;178583872 | chr2:179448601;179448600;179448599 |
N2A | 19202 | 57829;57830;57831 | chr2:178583874;178583873;178583872 | chr2:179448601;179448600;179448599 |
N2B | 12705 | 38338;38339;38340 | chr2:178583874;178583873;178583872 | chr2:179448601;179448600;179448599 |
Novex-1 | 12830 | 38713;38714;38715 | chr2:178583874;178583873;178583872 | chr2:179448601;179448600;179448599 |
Novex-2 | 12897 | 38914;38915;38916 | chr2:178583874;178583873;178583872 | chr2:179448601;179448600;179448599 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.001 | N | 0.195 | 0.149 | 0.143124449307 | gnomAD-4.0.0 | 1.63093E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.93748E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3733 | ambiguous | 0.2989 | benign | -0.712 | Destabilizing | 0.004 | N | 0.218 | neutral | N | 0.477755248 | None | None | N |
T/C | 0.7689 | likely_pathogenic | 0.6774 | pathogenic | -0.47 | Destabilizing | 0.909 | D | 0.521 | neutral | None | None | None | None | N |
T/D | 0.6246 | likely_pathogenic | 0.5785 | pathogenic | -0.278 | Destabilizing | 0.396 | N | 0.495 | neutral | None | None | None | None | N |
T/E | 0.7397 | likely_pathogenic | 0.7206 | pathogenic | -0.303 | Destabilizing | 0.157 | N | 0.494 | neutral | None | None | None | None | N |
T/F | 0.8426 | likely_pathogenic | 0.797 | pathogenic | -0.909 | Destabilizing | 0.726 | D | 0.585 | neutral | None | None | None | None | N |
T/G | 0.3281 | likely_benign | 0.2725 | benign | -0.936 | Destabilizing | 0.157 | N | 0.529 | neutral | None | None | None | None | N |
T/H | 0.6376 | likely_pathogenic | 0.5611 | ambiguous | -1.263 | Destabilizing | 0.909 | D | 0.563 | neutral | None | None | None | None | N |
T/I | 0.9204 | likely_pathogenic | 0.8889 | pathogenic | -0.218 | Destabilizing | 0.497 | N | 0.515 | neutral | N | 0.513914533 | None | None | N |
T/K | 0.5846 | likely_pathogenic | 0.5598 | ambiguous | -0.674 | Destabilizing | 0.157 | N | 0.495 | neutral | None | None | None | None | N |
T/L | 0.5288 | ambiguous | 0.4682 | ambiguous | -0.218 | Destabilizing | 0.272 | N | 0.505 | neutral | None | None | None | None | N |
T/M | 0.3746 | ambiguous | 0.3276 | benign | 0.114 | Stabilizing | 0.968 | D | 0.521 | neutral | None | None | None | None | N |
T/N | 0.2534 | likely_benign | 0.2165 | benign | -0.584 | Destabilizing | 0.331 | N | 0.497 | neutral | N | 0.471599502 | None | None | N |
T/P | 0.8176 | likely_pathogenic | 0.8291 | pathogenic | -0.351 | Destabilizing | 0.497 | N | 0.521 | neutral | N | 0.513914533 | None | None | N |
T/Q | 0.5172 | ambiguous | 0.4963 | ambiguous | -0.82 | Destabilizing | 0.567 | D | 0.522 | neutral | None | None | None | None | N |
T/R | 0.5444 | ambiguous | 0.5282 | ambiguous | -0.391 | Destabilizing | 0.567 | D | 0.513 | neutral | None | None | None | None | N |
T/S | 0.1533 | likely_benign | 0.1235 | benign | -0.833 | Destabilizing | 0.001 | N | 0.195 | neutral | N | 0.510400823 | None | None | N |
T/V | 0.8036 | likely_pathogenic | 0.7513 | pathogenic | -0.351 | Destabilizing | 0.272 | N | 0.506 | neutral | None | None | None | None | N |
T/W | 0.9305 | likely_pathogenic | 0.916 | pathogenic | -0.832 | Destabilizing | 0.968 | D | 0.639 | neutral | None | None | None | None | N |
T/Y | 0.8217 | likely_pathogenic | 0.7608 | pathogenic | -0.592 | Destabilizing | 0.726 | D | 0.58 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.