Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21774 | 65545;65546;65547 | chr2:178583862;178583861;178583860 | chr2:179448589;179448588;179448587 |
N2AB | 20133 | 60622;60623;60624 | chr2:178583862;178583861;178583860 | chr2:179448589;179448588;179448587 |
N2A | 19206 | 57841;57842;57843 | chr2:178583862;178583861;178583860 | chr2:179448589;179448588;179448587 |
N2B | 12709 | 38350;38351;38352 | chr2:178583862;178583861;178583860 | chr2:179448589;179448588;179448587 |
Novex-1 | 12834 | 38725;38726;38727 | chr2:178583862;178583861;178583860 | chr2:179448589;179448588;179448587 |
Novex-2 | 12901 | 38926;38927;38928 | chr2:178583862;178583861;178583860 | chr2:179448589;179448588;179448587 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.001 | N | 0.319 | 0.112 | 0.32580497728 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1908 | likely_benign | 0.2769 | benign | -2.197 | Highly Destabilizing | 0.001 | N | 0.319 | neutral | N | 0.470687676 | None | None | N |
V/C | 0.8267 | likely_pathogenic | 0.8632 | pathogenic | -2.299 | Highly Destabilizing | 0.947 | D | 0.763 | deleterious | None | None | None | None | N |
V/D | 0.9941 | likely_pathogenic | 0.9967 | pathogenic | -2.965 | Highly Destabilizing | 0.7 | D | 0.859 | deleterious | None | None | None | None | N |
V/E | 0.9854 | likely_pathogenic | 0.9906 | pathogenic | -2.695 | Highly Destabilizing | 0.638 | D | 0.836 | deleterious | D | 0.525675685 | None | None | N |
V/F | 0.8904 | likely_pathogenic | 0.8901 | pathogenic | -1.366 | Destabilizing | 0.826 | D | 0.806 | deleterious | None | None | None | None | N |
V/G | 0.6946 | likely_pathogenic | 0.7846 | pathogenic | -2.785 | Highly Destabilizing | 0.201 | N | 0.812 | deleterious | D | 0.537196575 | None | None | N |
V/H | 0.9959 | likely_pathogenic | 0.9969 | pathogenic | -2.638 | Highly Destabilizing | 0.982 | D | 0.824 | deleterious | None | None | None | None | N |
V/I | 0.1561 | likely_benign | 0.1325 | benign | -0.525 | Destabilizing | 0.172 | N | 0.511 | neutral | N | 0.510627323 | None | None | N |
V/K | 0.9906 | likely_pathogenic | 0.9931 | pathogenic | -1.825 | Destabilizing | 0.7 | D | 0.84 | deleterious | None | None | None | None | N |
V/L | 0.641 | likely_pathogenic | 0.6256 | pathogenic | -0.525 | Destabilizing | 0.094 | N | 0.618 | neutral | N | 0.511283471 | None | None | N |
V/M | 0.6812 | likely_pathogenic | 0.6634 | pathogenic | -0.956 | Destabilizing | 0.826 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/N | 0.9789 | likely_pathogenic | 0.9873 | pathogenic | -2.359 | Highly Destabilizing | 0.826 | D | 0.852 | deleterious | None | None | None | None | N |
V/P | 0.9864 | likely_pathogenic | 0.9937 | pathogenic | -1.058 | Destabilizing | 0.7 | D | 0.853 | deleterious | None | None | None | None | N |
V/Q | 0.9794 | likely_pathogenic | 0.9858 | pathogenic | -2.1 | Highly Destabilizing | 0.826 | D | 0.841 | deleterious | None | None | None | None | N |
V/R | 0.9728 | likely_pathogenic | 0.9816 | pathogenic | -1.815 | Destabilizing | 0.7 | D | 0.853 | deleterious | None | None | None | None | N |
V/S | 0.7334 | likely_pathogenic | 0.8302 | pathogenic | -3.005 | Highly Destabilizing | 0.25 | N | 0.815 | deleterious | None | None | None | None | N |
V/T | 0.5636 | ambiguous | 0.6668 | pathogenic | -2.566 | Highly Destabilizing | 0.25 | N | 0.705 | prob.neutral | None | None | None | None | N |
V/W | 0.9985 | likely_pathogenic | 0.9986 | pathogenic | -1.869 | Destabilizing | 0.982 | D | 0.798 | deleterious | None | None | None | None | N |
V/Y | 0.9873 | likely_pathogenic | 0.9893 | pathogenic | -1.503 | Destabilizing | 0.826 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.