Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21776 | 65551;65552;65553 | chr2:178583856;178583855;178583854 | chr2:179448583;179448582;179448581 |
N2AB | 20135 | 60628;60629;60630 | chr2:178583856;178583855;178583854 | chr2:179448583;179448582;179448581 |
N2A | 19208 | 57847;57848;57849 | chr2:178583856;178583855;178583854 | chr2:179448583;179448582;179448581 |
N2B | 12711 | 38356;38357;38358 | chr2:178583856;178583855;178583854 | chr2:179448583;179448582;179448581 |
Novex-1 | 12836 | 38731;38732;38733 | chr2:178583856;178583855;178583854 | chr2:179448583;179448582;179448581 |
Novex-2 | 12903 | 38932;38933;38934 | chr2:178583856;178583855;178583854 | chr2:179448583;179448582;179448581 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 1.0 | N | 0.766 | 0.43 | 0.683172565385 | gnomAD-4.0.0 | 1.60625E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88224E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.95 | likely_pathogenic | 0.9439 | pathogenic | -2.466 | Highly Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
L/C | 0.897 | likely_pathogenic | 0.8839 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -3.062 | Highly Destabilizing | 1.0 | D | 0.947 | deleterious | None | None | None | None | N |
L/E | 0.9968 | likely_pathogenic | 0.9972 | pathogenic | -2.736 | Highly Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
L/F | 0.6498 | likely_pathogenic | 0.6406 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/G | 0.9926 | likely_pathogenic | 0.9925 | pathogenic | -3.081 | Highly Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
L/H | 0.9919 | likely_pathogenic | 0.9932 | pathogenic | -2.879 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
L/I | 0.179 | likely_benign | 0.1431 | benign | -0.625 | Destabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | N |
L/K | 0.9937 | likely_pathogenic | 0.9953 | pathogenic | -1.783 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/M | 0.2932 | likely_benign | 0.2623 | benign | -0.712 | Destabilizing | 1.0 | D | 0.766 | deleterious | N | 0.519419304 | None | None | N |
L/N | 0.9968 | likely_pathogenic | 0.997 | pathogenic | -2.481 | Highly Destabilizing | 1.0 | D | 0.948 | deleterious | None | None | None | None | N |
L/P | 0.9971 | likely_pathogenic | 0.9973 | pathogenic | -1.228 | Destabilizing | 1.0 | D | 0.948 | deleterious | D | 0.554413273 | None | None | N |
L/Q | 0.9843 | likely_pathogenic | 0.9872 | pathogenic | -2.1 | Highly Destabilizing | 1.0 | D | 0.947 | deleterious | D | 0.554413273 | None | None | N |
L/R | 0.9865 | likely_pathogenic | 0.9901 | pathogenic | -1.931 | Destabilizing | 1.0 | D | 0.937 | deleterious | D | 0.554413273 | None | None | N |
L/S | 0.9938 | likely_pathogenic | 0.9936 | pathogenic | -3.028 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/T | 0.9695 | likely_pathogenic | 0.9665 | pathogenic | -2.535 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/V | 0.182 | likely_benign | 0.1458 | benign | -1.228 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.477439306 | None | None | N |
L/W | 0.9734 | likely_pathogenic | 0.9784 | pathogenic | -1.889 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/Y | 0.9774 | likely_pathogenic | 0.9784 | pathogenic | -1.608 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.