Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21787 | 65584;65585;65586 | chr2:178583823;178583822;178583821 | chr2:179448550;179448549;179448548 |
N2AB | 20146 | 60661;60662;60663 | chr2:178583823;178583822;178583821 | chr2:179448550;179448549;179448548 |
N2A | 19219 | 57880;57881;57882 | chr2:178583823;178583822;178583821 | chr2:179448550;179448549;179448548 |
N2B | 12722 | 38389;38390;38391 | chr2:178583823;178583822;178583821 | chr2:179448550;179448549;179448548 |
Novex-1 | 12847 | 38764;38765;38766 | chr2:178583823;178583822;178583821 | chr2:179448550;179448549;179448548 |
Novex-2 | 12914 | 38965;38966;38967 | chr2:178583823;178583822;178583821 | chr2:179448550;179448549;179448548 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1290046297 | None | 0.999 | N | 0.701 | 0.292 | 0.272639205421 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/N | rs1290046297 | None | 0.999 | N | 0.701 | 0.292 | 0.272639205421 | gnomAD-4.0.0 | 6.57661E-06 | None | None | None | None | I | None | 2.41383E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2346 | likely_benign | 0.2112 | benign | -0.502 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | I |
S/C | 0.2143 | likely_benign | 0.1892 | benign | -0.245 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.487021185 | None | None | I |
S/D | 0.935 | likely_pathogenic | 0.9155 | pathogenic | 0.02 | Stabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | I |
S/E | 0.9389 | likely_pathogenic | 0.9239 | pathogenic | -0.058 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
S/F | 0.665 | likely_pathogenic | 0.605 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
S/G | 0.3099 | likely_benign | 0.2842 | benign | -0.647 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.49107877 | None | None | I |
S/H | 0.7711 | likely_pathogenic | 0.722 | pathogenic | -1.234 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
S/I | 0.7285 | likely_pathogenic | 0.6483 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.809 | deleterious | N | 0.494970449 | None | None | I |
S/K | 0.9787 | likely_pathogenic | 0.9706 | pathogenic | -0.529 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
S/L | 0.3979 | ambiguous | 0.3444 | ambiguous | -0.246 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
S/M | 0.5392 | ambiguous | 0.4718 | ambiguous | 0.171 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
S/N | 0.5904 | likely_pathogenic | 0.5253 | ambiguous | -0.267 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.483614144 | None | None | I |
S/P | 0.9744 | likely_pathogenic | 0.9697 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
S/Q | 0.8493 | likely_pathogenic | 0.8256 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
S/R | 0.962 | likely_pathogenic | 0.9493 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.483725821 | None | None | I |
S/T | 0.3748 | ambiguous | 0.3182 | benign | -0.372 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.480562724 | None | None | I |
S/V | 0.6711 | likely_pathogenic | 0.5872 | pathogenic | -0.301 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
S/W | 0.712 | likely_pathogenic | 0.6654 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
S/Y | 0.5821 | likely_pathogenic | 0.5263 | ambiguous | -0.728 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.