Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21788 | 65587;65588;65589 | chr2:178583820;178583819;178583818 | chr2:179448547;179448546;179448545 |
N2AB | 20147 | 60664;60665;60666 | chr2:178583820;178583819;178583818 | chr2:179448547;179448546;179448545 |
N2A | 19220 | 57883;57884;57885 | chr2:178583820;178583819;178583818 | chr2:179448547;179448546;179448545 |
N2B | 12723 | 38392;38393;38394 | chr2:178583820;178583819;178583818 | chr2:179448547;179448546;179448545 |
Novex-1 | 12848 | 38767;38768;38769 | chr2:178583820;178583819;178583818 | chr2:179448547;179448546;179448545 |
Novex-2 | 12915 | 38968;38969;38970 | chr2:178583820;178583819;178583818 | chr2:179448547;179448546;179448545 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.781 | N | 0.697 | 0.318 | 0.512825096792 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 7.32654E-05 |
K/N | None | None | 0.638 | N | 0.662 | 0.227 | 0.186928172975 | gnomAD-4.0.0 | 3.20148E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.74363E-06 | 0 | 0 |
K/T | rs1330714909 | None | 0.638 | N | 0.631 | 0.22 | 0.28297238246 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs1330714909 | None | 0.638 | N | 0.631 | 0.22 | 0.28297238246 | gnomAD-4.0.0 | 1.31546E-05 | None | None | None | None | N | None | 4.82975E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5807 | likely_pathogenic | 0.4777 | ambiguous | 0.045 | Stabilizing | 0.399 | N | 0.605 | neutral | None | None | None | None | N |
K/C | 0.8497 | likely_pathogenic | 0.7663 | pathogenic | -0.292 | Destabilizing | 0.982 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/D | 0.8278 | likely_pathogenic | 0.7494 | pathogenic | None | Stabilizing | 0.7 | D | 0.672 | neutral | None | None | None | None | N |
K/E | 0.4211 | ambiguous | 0.3427 | ambiguous | -0.002 | Destabilizing | 0.201 | N | 0.57 | neutral | N | 0.488155895 | None | None | N |
K/F | 0.9382 | likely_pathogenic | 0.8944 | pathogenic | -0.229 | Destabilizing | 0.947 | D | 0.676 | prob.neutral | None | None | None | None | N |
K/G | 0.7235 | likely_pathogenic | 0.6088 | pathogenic | -0.121 | Destabilizing | 0.7 | D | 0.585 | neutral | None | None | None | None | N |
K/H | 0.5005 | ambiguous | 0.3919 | ambiguous | -0.29 | Destabilizing | 0.947 | D | 0.649 | neutral | None | None | None | None | N |
K/I | 0.6571 | likely_pathogenic | 0.5711 | pathogenic | 0.398 | Stabilizing | 0.781 | D | 0.697 | prob.neutral | N | 0.483005033 | None | None | N |
K/L | 0.6258 | likely_pathogenic | 0.5331 | ambiguous | 0.398 | Stabilizing | 0.7 | D | 0.585 | neutral | None | None | None | None | N |
K/M | 0.5017 | ambiguous | 0.4343 | ambiguous | 0.115 | Stabilizing | 0.982 | D | 0.644 | neutral | None | None | None | None | N |
K/N | 0.7028 | likely_pathogenic | 0.6008 | pathogenic | 0.18 | Stabilizing | 0.638 | D | 0.662 | neutral | N | 0.473027853 | None | None | N |
K/P | 0.6579 | likely_pathogenic | 0.566 | pathogenic | 0.307 | Stabilizing | 0.826 | D | 0.668 | neutral | None | None | None | None | N |
K/Q | 0.2352 | likely_benign | 0.1844 | benign | 0.022 | Stabilizing | 0.638 | D | 0.677 | prob.neutral | N | 0.521385821 | None | None | N |
K/R | 0.0852 | likely_benign | 0.0734 | benign | 0.005 | Stabilizing | 0.002 | N | 0.208 | neutral | N | 0.466052613 | None | None | N |
K/S | 0.6929 | likely_pathogenic | 0.5963 | pathogenic | -0.27 | Destabilizing | 0.399 | N | 0.61 | neutral | None | None | None | None | N |
K/T | 0.4245 | ambiguous | 0.3509 | ambiguous | -0.135 | Destabilizing | 0.638 | D | 0.631 | neutral | N | 0.502626702 | None | None | N |
K/V | 0.5501 | ambiguous | 0.4736 | ambiguous | 0.307 | Stabilizing | 0.7 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/W | 0.9168 | likely_pathogenic | 0.8556 | pathogenic | -0.284 | Destabilizing | 0.982 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/Y | 0.859 | likely_pathogenic | 0.7819 | pathogenic | 0.079 | Stabilizing | 0.826 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.