Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21789 | 65590;65591;65592 | chr2:178583817;178583816;178583815 | chr2:179448544;179448543;179448542 |
N2AB | 20148 | 60667;60668;60669 | chr2:178583817;178583816;178583815 | chr2:179448544;179448543;179448542 |
N2A | 19221 | 57886;57887;57888 | chr2:178583817;178583816;178583815 | chr2:179448544;179448543;179448542 |
N2B | 12724 | 38395;38396;38397 | chr2:178583817;178583816;178583815 | chr2:179448544;179448543;179448542 |
Novex-1 | 12849 | 38770;38771;38772 | chr2:178583817;178583816;178583815 | chr2:179448544;179448543;179448542 |
Novex-2 | 12916 | 38971;38972;38973 | chr2:178583817;178583816;178583815 | chr2:179448544;179448543;179448542 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs2048319290 | None | 0.684 | D | 0.795 | 0.474 | 0.707130027437 | gnomAD-4.0.0 | 1.12037E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.00997E-05 | 0 | 0 |
I/V | None | None | 0.003 | N | 0.227 | 0.09 | 0.524166996187 | gnomAD-4.0.0 | 1.60089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87223E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.966 | likely_pathogenic | 0.9329 | pathogenic | -2.04 | Highly Destabilizing | 0.373 | N | 0.735 | prob.delet. | None | None | None | None | N |
I/C | 0.9624 | likely_pathogenic | 0.9292 | pathogenic | -1.329 | Destabilizing | 0.996 | D | 0.773 | deleterious | None | None | None | None | N |
I/D | 0.9923 | likely_pathogenic | 0.9874 | pathogenic | -1.405 | Destabilizing | 0.984 | D | 0.835 | deleterious | None | None | None | None | N |
I/E | 0.9806 | likely_pathogenic | 0.972 | pathogenic | -1.299 | Destabilizing | 0.953 | D | 0.822 | deleterious | None | None | None | None | N |
I/F | 0.779 | likely_pathogenic | 0.6336 | pathogenic | -1.249 | Destabilizing | 0.884 | D | 0.784 | deleterious | N | 0.521409724 | None | None | N |
I/G | 0.9892 | likely_pathogenic | 0.9792 | pathogenic | -2.474 | Highly Destabilizing | 0.953 | D | 0.825 | deleterious | None | None | None | None | N |
I/H | 0.98 | likely_pathogenic | 0.9601 | pathogenic | -1.626 | Destabilizing | 0.996 | D | 0.784 | deleterious | None | None | None | None | N |
I/K | 0.954 | likely_pathogenic | 0.9326 | pathogenic | -1.362 | Destabilizing | 0.953 | D | 0.827 | deleterious | None | None | None | None | N |
I/L | 0.2434 | likely_benign | 0.1636 | benign | -0.862 | Destabilizing | 0.001 | N | 0.203 | neutral | N | 0.516926938 | None | None | N |
I/M | 0.352 | ambiguous | 0.2578 | benign | -0.736 | Destabilizing | 0.884 | D | 0.733 | prob.delet. | D | 0.530692569 | None | None | N |
I/N | 0.8768 | likely_pathogenic | 0.8244 | pathogenic | -1.369 | Destabilizing | 0.979 | D | 0.823 | deleterious | D | 0.524958577 | None | None | N |
I/P | 0.932 | likely_pathogenic | 0.897 | pathogenic | -1.227 | Destabilizing | 0.984 | D | 0.833 | deleterious | None | None | None | None | N |
I/Q | 0.9671 | likely_pathogenic | 0.9445 | pathogenic | -1.412 | Destabilizing | 0.984 | D | 0.815 | deleterious | None | None | None | None | N |
I/R | 0.9445 | likely_pathogenic | 0.9123 | pathogenic | -0.887 | Destabilizing | 0.953 | D | 0.831 | deleterious | None | None | None | None | N |
I/S | 0.9674 | likely_pathogenic | 0.9432 | pathogenic | -2.132 | Highly Destabilizing | 0.815 | D | 0.813 | deleterious | D | 0.524198109 | None | None | N |
I/T | 0.9487 | likely_pathogenic | 0.9111 | pathogenic | -1.89 | Destabilizing | 0.684 | D | 0.795 | deleterious | D | 0.524198109 | None | None | N |
I/V | 0.1912 | likely_benign | 0.1517 | benign | -1.227 | Destabilizing | 0.003 | N | 0.227 | neutral | N | 0.518753735 | None | None | N |
I/W | 0.9831 | likely_pathogenic | 0.9679 | pathogenic | -1.398 | Destabilizing | 0.996 | D | 0.79 | deleterious | None | None | None | None | N |
I/Y | 0.9442 | likely_pathogenic | 0.9057 | pathogenic | -1.148 | Destabilizing | 0.953 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.