Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2179 | 6760;6761;6762 | chr2:178775176;178775175;178775174 | chr2:179639903;179639902;179639901 |
N2AB | 2179 | 6760;6761;6762 | chr2:178775176;178775175;178775174 | chr2:179639903;179639902;179639901 |
N2A | 2179 | 6760;6761;6762 | chr2:178775176;178775175;178775174 | chr2:179639903;179639902;179639901 |
N2B | 2133 | 6622;6623;6624 | chr2:178775176;178775175;178775174 | chr2:179639903;179639902;179639901 |
Novex-1 | 2133 | 6622;6623;6624 | chr2:178775176;178775175;178775174 | chr2:179639903;179639902;179639901 |
Novex-2 | 2133 | 6622;6623;6624 | chr2:178775176;178775175;178775174 | chr2:179639903;179639902;179639901 |
Novex-3 | 2179 | 6760;6761;6762 | chr2:178775176;178775175;178775174 | chr2:179639903;179639902;179639901 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | None | None | 0.126 | N | 0.311 | 0.272 | 0.466991082792 | gnomAD-4.0.0 | 1.59088E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.775E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0897 | likely_benign | 0.0838 | benign | -0.82 | Destabilizing | 0.001 | N | 0.131 | neutral | N | 0.49697326 | None | None | N |
E/C | 0.7074 | likely_pathogenic | 0.6661 | pathogenic | -0.368 | Destabilizing | 0.987 | D | 0.263 | neutral | None | None | None | None | N |
E/D | 0.1345 | likely_benign | 0.1276 | benign | -0.666 | Destabilizing | 0.126 | N | 0.221 | neutral | N | 0.512583814 | None | None | N |
E/F | 0.5956 | likely_pathogenic | 0.5765 | pathogenic | -0.208 | Destabilizing | 0.868 | D | 0.34 | neutral | None | None | None | None | N |
E/G | 0.1314 | likely_benign | 0.1208 | benign | -1.137 | Destabilizing | 0.126 | N | 0.283 | neutral | N | 0.48749084 | None | None | N |
E/H | 0.3049 | likely_benign | 0.2932 | benign | -0.239 | Destabilizing | 0.003 | N | 0.159 | neutral | None | None | None | None | N |
E/I | 0.2146 | likely_benign | 0.2123 | benign | 0.032 | Stabilizing | 0.481 | N | 0.413 | neutral | None | None | None | None | N |
E/K | 0.0893 | likely_benign | 0.0966 | benign | -0.177 | Destabilizing | 0.001 | N | 0.117 | neutral | N | 0.475875119 | None | None | N |
E/L | 0.2302 | likely_benign | 0.2225 | benign | 0.032 | Stabilizing | 0.276 | N | 0.336 | neutral | None | None | None | None | N |
E/M | 0.257 | likely_benign | 0.2581 | benign | 0.316 | Stabilizing | 0.868 | D | 0.279 | neutral | None | None | None | None | N |
E/N | 0.1552 | likely_benign | 0.1429 | benign | -0.705 | Destabilizing | 0.001 | N | 0.095 | neutral | None | None | None | None | N |
E/P | 0.2285 | likely_benign | 0.2154 | benign | -0.231 | Destabilizing | 0.003 | N | 0.157 | neutral | None | None | None | None | N |
E/Q | 0.0913 | likely_benign | 0.0878 | benign | -0.599 | Destabilizing | 0.009 | N | 0.141 | neutral | N | 0.504974046 | None | None | N |
E/R | 0.1712 | likely_benign | 0.1797 | benign | 0.15 | Stabilizing | 0.16 | N | 0.201 | neutral | None | None | None | None | N |
E/S | 0.1383 | likely_benign | 0.1242 | benign | -0.959 | Destabilizing | 0.077 | N | 0.162 | neutral | None | None | None | None | N |
E/T | 0.1299 | likely_benign | 0.1239 | benign | -0.688 | Destabilizing | 0.005 | N | 0.134 | neutral | None | None | None | None | N |
E/V | 0.1282 | likely_benign | 0.1257 | benign | -0.231 | Destabilizing | 0.126 | N | 0.311 | neutral | N | 0.507393203 | None | None | N |
E/W | 0.8422 | likely_pathogenic | 0.8337 | pathogenic | 0.129 | Stabilizing | 0.987 | D | 0.271 | neutral | None | None | None | None | N |
E/Y | 0.4541 | ambiguous | 0.4359 | ambiguous | 0.076 | Stabilizing | 0.764 | D | 0.378 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.