Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21796 | 65611;65612;65613 | chr2:178583796;178583795;178583794 | chr2:179448523;179448522;179448521 |
N2AB | 20155 | 60688;60689;60690 | chr2:178583796;178583795;178583794 | chr2:179448523;179448522;179448521 |
N2A | 19228 | 57907;57908;57909 | chr2:178583796;178583795;178583794 | chr2:179448523;179448522;179448521 |
N2B | 12731 | 38416;38417;38418 | chr2:178583796;178583795;178583794 | chr2:179448523;179448522;179448521 |
Novex-1 | 12856 | 38791;38792;38793 | chr2:178583796;178583795;178583794 | chr2:179448523;179448522;179448521 |
Novex-2 | 12923 | 38992;38993;38994 | chr2:178583796;178583795;178583794 | chr2:179448523;179448522;179448521 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs752002587 | 0.211 | 0.669 | N | 0.635 | 0.223 | 0.446111551642 | gnomAD-2.1.1 | 4.12E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.12E-06 | 0 |
A/V | rs752002587 | 0.211 | 0.669 | N | 0.635 | 0.223 | 0.446111551642 | gnomAD-4.0.0 | 1.60002E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87143E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3915 | ambiguous | 0.3893 | ambiguous | -0.299 | Destabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
A/D | 0.8569 | likely_pathogenic | 0.8247 | pathogenic | -2.051 | Highly Destabilizing | 0.934 | D | 0.839 | deleterious | N | 0.48685292 | None | None | N |
A/E | 0.6311 | likely_pathogenic | 0.6058 | pathogenic | -1.802 | Destabilizing | 0.842 | D | 0.795 | deleterious | None | None | None | None | N |
A/F | 0.2932 | likely_benign | 0.2549 | benign | -0.346 | Destabilizing | 0.016 | N | 0.703 | prob.neutral | None | None | None | None | N |
A/G | 0.2225 | likely_benign | 0.2117 | benign | -1.12 | Destabilizing | 0.669 | D | 0.673 | neutral | N | 0.499645112 | None | None | N |
A/H | 0.6105 | likely_pathogenic | 0.5808 | pathogenic | -1.865 | Destabilizing | 0.949 | D | 0.841 | deleterious | None | None | None | None | N |
A/I | 0.3187 | likely_benign | 0.2635 | benign | 0.742 | Stabilizing | 0.728 | D | 0.773 | deleterious | None | None | None | None | N |
A/K | 0.6976 | likely_pathogenic | 0.6681 | pathogenic | -0.533 | Destabilizing | 0.842 | D | 0.787 | deleterious | None | None | None | None | N |
A/L | 0.2849 | likely_benign | 0.2532 | benign | 0.742 | Stabilizing | 0.525 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/M | 0.248 | likely_benign | 0.2158 | benign | 0.486 | Stabilizing | 0.325 | N | 0.662 | neutral | None | None | None | None | N |
A/N | 0.6196 | likely_pathogenic | 0.5695 | pathogenic | -0.97 | Destabilizing | 0.949 | D | 0.839 | deleterious | None | None | None | None | N |
A/P | 0.9899 | likely_pathogenic | 0.9877 | pathogenic | 0.327 | Stabilizing | 0.966 | D | 0.847 | deleterious | N | 0.48685292 | None | None | N |
A/Q | 0.4872 | ambiguous | 0.4762 | ambiguous | -0.66 | Destabilizing | 0.974 | D | 0.848 | deleterious | None | None | None | None | N |
A/R | 0.5999 | likely_pathogenic | 0.586 | pathogenic | -0.921 | Destabilizing | 0.949 | D | 0.842 | deleterious | None | None | None | None | N |
A/S | 0.1375 | likely_benign | 0.1254 | benign | -1.283 | Destabilizing | 0.051 | N | 0.386 | neutral | N | 0.491582989 | None | None | N |
A/T | 0.1511 | likely_benign | 0.1247 | benign | -0.91 | Destabilizing | 0.669 | D | 0.725 | prob.delet. | N | 0.502010626 | None | None | N |
A/V | 0.1633 | likely_benign | 0.1391 | benign | 0.327 | Stabilizing | 0.669 | D | 0.635 | neutral | N | 0.487521177 | None | None | N |
A/W | 0.7885 | likely_pathogenic | 0.7642 | pathogenic | -1.295 | Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
A/Y | 0.393 | ambiguous | 0.373 | ambiguous | -0.621 | Destabilizing | 0.067 | N | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.