Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21798 | 65617;65618;65619 | chr2:178583790;178583789;178583788 | chr2:179448517;179448516;179448515 |
N2AB | 20157 | 60694;60695;60696 | chr2:178583790;178583789;178583788 | chr2:179448517;179448516;179448515 |
N2A | 19230 | 57913;57914;57915 | chr2:178583790;178583789;178583788 | chr2:179448517;179448516;179448515 |
N2B | 12733 | 38422;38423;38424 | chr2:178583790;178583789;178583788 | chr2:179448517;179448516;179448515 |
Novex-1 | 12858 | 38797;38798;38799 | chr2:178583790;178583789;178583788 | chr2:179448517;179448516;179448515 |
Novex-2 | 12925 | 38998;38999;39000 | chr2:178583790;178583789;178583788 | chr2:179448517;179448516;179448515 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs776173264 | -0.616 | 1.0 | N | 0.727 | 0.464 | 0.483521307902 | gnomAD-2.1.1 | 4.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.1E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5512 | ambiguous | 0.4357 | ambiguous | -0.598 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
K/C | 0.7015 | likely_pathogenic | 0.6312 | pathogenic | -0.541 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/D | 0.8884 | likely_pathogenic | 0.8036 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
K/E | 0.3719 | ambiguous | 0.2659 | benign | 0.092 | Stabilizing | 0.999 | D | 0.565 | neutral | N | 0.4439624 | None | None | N |
K/F | 0.8575 | likely_pathogenic | 0.7947 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/G | 0.7542 | likely_pathogenic | 0.665 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/H | 0.4397 | ambiguous | 0.3639 | ambiguous | -1.127 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
K/I | 0.4879 | ambiguous | 0.3767 | ambiguous | 0.353 | Stabilizing | 1.0 | D | 0.772 | deleterious | N | 0.474473111 | None | None | N |
K/L | 0.3881 | ambiguous | 0.3123 | benign | 0.353 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/M | 0.3611 | ambiguous | 0.279 | benign | 0.051 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
K/N | 0.7269 | likely_pathogenic | 0.6149 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.66 | neutral | N | 0.520655102 | None | None | N |
K/P | 0.6034 | likely_pathogenic | 0.5031 | ambiguous | 0.066 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
K/Q | 0.1828 | likely_benign | 0.1419 | benign | -0.407 | Destabilizing | 1.0 | D | 0.644 | neutral | N | 0.512707623 | None | None | N |
K/R | 0.0816 | likely_benign | 0.0764 | benign | -0.474 | Destabilizing | 0.999 | D | 0.529 | neutral | N | 0.467572766 | None | None | N |
K/S | 0.6942 | likely_pathogenic | 0.5832 | pathogenic | -1.051 | Destabilizing | 0.999 | D | 0.598 | neutral | None | None | None | None | N |
K/T | 0.4171 | ambiguous | 0.3134 | benign | -0.709 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.500645189 | None | None | N |
K/V | 0.4265 | ambiguous | 0.3346 | benign | 0.066 | Stabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
K/W | 0.8565 | likely_pathogenic | 0.8109 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/Y | 0.7614 | likely_pathogenic | 0.6841 | pathogenic | 0.14 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.