Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21802 | 65629;65630;65631 | chr2:178583778;178583777;178583776 | chr2:179448505;179448504;179448503 |
N2AB | 20161 | 60706;60707;60708 | chr2:178583778;178583777;178583776 | chr2:179448505;179448504;179448503 |
N2A | 19234 | 57925;57926;57927 | chr2:178583778;178583777;178583776 | chr2:179448505;179448504;179448503 |
N2B | 12737 | 38434;38435;38436 | chr2:178583778;178583777;178583776 | chr2:179448505;179448504;179448503 |
Novex-1 | 12862 | 38809;38810;38811 | chr2:178583778;178583777;178583776 | chr2:179448505;179448504;179448503 |
Novex-2 | 12929 | 39010;39011;39012 | chr2:178583778;178583777;178583776 | chr2:179448505;179448504;179448503 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1228795197 | -0.016 | 0.005 | N | 0.145 | 0.07 | 0.112648838833 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.34E-05 | None | 0 | 0 | 0 |
D/E | rs1228795197 | -0.016 | 0.005 | N | 0.145 | 0.07 | 0.112648838833 | gnomAD-4.0.0 | 1.59782E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44259E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2018 | likely_benign | 0.1645 | benign | -0.008 | Destabilizing | 0.051 | N | 0.211 | neutral | N | 0.498796963 | None | None | N |
D/C | 0.6428 | likely_pathogenic | 0.5738 | pathogenic | -0.209 | Destabilizing | 0.998 | D | 0.345 | neutral | None | None | None | None | N |
D/E | 0.131 | likely_benign | 0.108 | benign | -0.221 | Destabilizing | 0.005 | N | 0.145 | neutral | N | 0.431723822 | None | None | N |
D/F | 0.6517 | likely_pathogenic | 0.5731 | pathogenic | -0.073 | Destabilizing | 0.991 | D | 0.308 | neutral | None | None | None | None | N |
D/G | 0.1606 | likely_benign | 0.1294 | benign | -0.117 | Destabilizing | 0.454 | N | 0.313 | neutral | N | 0.455272685 | None | None | N |
D/H | 0.3768 | ambiguous | 0.2832 | benign | 0.561 | Stabilizing | 0.966 | D | 0.296 | neutral | N | 0.466342355 | None | None | N |
D/I | 0.4843 | ambiguous | 0.3697 | ambiguous | 0.215 | Stabilizing | 0.974 | D | 0.329 | neutral | None | None | None | None | N |
D/K | 0.3994 | ambiguous | 0.2706 | benign | 0.349 | Stabilizing | 0.728 | D | 0.31 | neutral | None | None | None | None | N |
D/L | 0.436 | ambiguous | 0.338 | benign | 0.215 | Stabilizing | 0.842 | D | 0.342 | neutral | None | None | None | None | N |
D/M | 0.609 | likely_pathogenic | 0.5121 | ambiguous | -0.013 | Destabilizing | 0.998 | D | 0.312 | neutral | None | None | None | None | N |
D/N | 0.1091 | likely_benign | 0.0881 | benign | 0.16 | Stabilizing | 0.012 | N | 0.234 | neutral | N | 0.477034824 | None | None | N |
D/P | 0.7205 | likely_pathogenic | 0.5103 | ambiguous | 0.159 | Stabilizing | 0.974 | D | 0.318 | neutral | None | None | None | None | N |
D/Q | 0.3097 | likely_benign | 0.2432 | benign | 0.164 | Stabilizing | 0.728 | D | 0.287 | neutral | None | None | None | None | N |
D/R | 0.4814 | ambiguous | 0.3428 | ambiguous | 0.611 | Stabilizing | 0.949 | D | 0.312 | neutral | None | None | None | None | N |
D/S | 0.1319 | likely_benign | 0.1082 | benign | 0.032 | Stabilizing | 0.525 | D | 0.304 | neutral | None | None | None | None | N |
D/T | 0.2694 | likely_benign | 0.2036 | benign | 0.126 | Stabilizing | 0.842 | D | 0.289 | neutral | None | None | None | None | N |
D/V | 0.2946 | likely_benign | 0.2257 | benign | 0.159 | Stabilizing | 0.801 | D | 0.319 | neutral | N | 0.483712867 | None | None | N |
D/W | 0.8857 | likely_pathogenic | 0.8305 | pathogenic | -0.025 | Destabilizing | 0.998 | D | 0.47 | neutral | None | None | None | None | N |
D/Y | 0.3206 | likely_benign | 0.2637 | benign | 0.153 | Stabilizing | 0.989 | D | 0.306 | neutral | N | 0.504973574 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.