Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21805 | 65638;65639;65640 | chr2:178583769;178583768;178583767 | chr2:179448496;179448495;179448494 |
N2AB | 20164 | 60715;60716;60717 | chr2:178583769;178583768;178583767 | chr2:179448496;179448495;179448494 |
N2A | 19237 | 57934;57935;57936 | chr2:178583769;178583768;178583767 | chr2:179448496;179448495;179448494 |
N2B | 12740 | 38443;38444;38445 | chr2:178583769;178583768;178583767 | chr2:179448496;179448495;179448494 |
Novex-1 | 12865 | 38818;38819;38820 | chr2:178583769;178583768;178583767 | chr2:179448496;179448495;179448494 |
Novex-2 | 12932 | 39019;39020;39021 | chr2:178583769;178583768;178583767 | chr2:179448496;179448495;179448494 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | None | N | 0.351 | 0.295 | 0.499535901811 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
V/I | None | None | None | N | 0.182 | 0.119 | 0.349204839081 | gnomAD-4.0.0 | 1.597E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41663E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2269 | likely_benign | 0.2064 | benign | -0.951 | Destabilizing | 0.027 | N | 0.343 | neutral | N | 0.51511321 | None | None | N |
V/C | 0.6572 | likely_pathogenic | 0.6363 | pathogenic | -0.55 | Destabilizing | 0.935 | D | 0.411 | neutral | None | None | None | None | N |
V/D | 0.3403 | ambiguous | 0.3293 | benign | -0.774 | Destabilizing | 0.081 | N | 0.399 | neutral | None | None | None | None | N |
V/E | 0.2094 | likely_benign | 0.214 | benign | -0.856 | Destabilizing | None | N | 0.351 | neutral | N | 0.494161934 | None | None | N |
V/F | 0.159 | likely_benign | 0.149 | benign | -0.946 | Destabilizing | 0.38 | N | 0.464 | neutral | None | None | None | None | N |
V/G | 0.2208 | likely_benign | 0.2153 | benign | -1.16 | Destabilizing | 0.117 | N | 0.402 | neutral | N | 0.4855627 | None | None | N |
V/H | 0.44 | ambiguous | 0.4258 | ambiguous | -0.696 | Destabilizing | 0.555 | D | 0.448 | neutral | None | None | None | None | N |
V/I | 0.0763 | likely_benign | 0.0686 | benign | -0.522 | Destabilizing | None | N | 0.182 | neutral | N | 0.451621878 | None | None | N |
V/K | 0.2925 | likely_benign | 0.3033 | benign | -0.815 | Destabilizing | 0.081 | N | 0.358 | neutral | None | None | None | None | N |
V/L | 0.1546 | likely_benign | 0.1456 | benign | -0.522 | Destabilizing | 0.009 | N | 0.353 | neutral | N | 0.501010549 | None | None | N |
V/M | 0.1334 | likely_benign | 0.1155 | benign | -0.354 | Destabilizing | 0.38 | N | 0.465 | neutral | None | None | None | None | N |
V/N | 0.2144 | likely_benign | 0.1879 | benign | -0.474 | Destabilizing | 0.002 | N | 0.381 | neutral | None | None | None | None | N |
V/P | 0.8699 | likely_pathogenic | 0.873 | pathogenic | -0.629 | Destabilizing | 0.555 | D | 0.449 | neutral | None | None | None | None | N |
V/Q | 0.2116 | likely_benign | 0.2154 | benign | -0.729 | Destabilizing | 0.235 | N | 0.449 | neutral | None | None | None | None | N |
V/R | 0.2708 | likely_benign | 0.2946 | benign | -0.217 | Destabilizing | 0.38 | N | 0.463 | neutral | None | None | None | None | N |
V/S | 0.2107 | likely_benign | 0.19 | benign | -0.865 | Destabilizing | 0.081 | N | 0.374 | neutral | None | None | None | None | N |
V/T | 0.194 | likely_benign | 0.1625 | benign | -0.85 | Destabilizing | 0.001 | N | 0.122 | neutral | None | None | None | None | N |
V/W | 0.7199 | likely_pathogenic | 0.7046 | pathogenic | -1.058 | Destabilizing | 0.935 | D | 0.499 | neutral | None | None | None | None | N |
V/Y | 0.4478 | ambiguous | 0.436 | ambiguous | -0.785 | Destabilizing | 0.555 | D | 0.457 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.