Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21812 | 65659;65660;65661 | chr2:178583748;178583747;178583746 | chr2:179448475;179448474;179448473 |
N2AB | 20171 | 60736;60737;60738 | chr2:178583748;178583747;178583746 | chr2:179448475;179448474;179448473 |
N2A | 19244 | 57955;57956;57957 | chr2:178583748;178583747;178583746 | chr2:179448475;179448474;179448473 |
N2B | 12747 | 38464;38465;38466 | chr2:178583748;178583747;178583746 | chr2:179448475;179448474;179448473 |
Novex-1 | 12872 | 38839;38840;38841 | chr2:178583748;178583747;178583746 | chr2:179448475;179448474;179448473 |
Novex-2 | 12939 | 39040;39041;39042 | chr2:178583748;178583747;178583746 | chr2:179448475;179448474;179448473 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs267599042 | 0.009 | 0.189 | N | 0.163 | 0.079 | 0.124217242631 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
H/N | rs267599042 | 0.009 | 0.189 | N | 0.163 | 0.079 | 0.124217242631 | gnomAD-4.0.0 | 3.19077E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86405E-06 | 0 | 3.03288E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1729 | likely_benign | 0.1576 | benign | 0.384 | Stabilizing | 0.028 | N | 0.187 | neutral | None | None | None | None | N |
H/C | 0.1684 | likely_benign | 0.1438 | benign | 0.861 | Stabilizing | 0.942 | D | 0.356 | neutral | None | None | None | None | N |
H/D | 0.1884 | likely_benign | 0.1775 | benign | -0.091 | Destabilizing | 0.189 | N | 0.234 | neutral | N | 0.41146598 | None | None | N |
H/E | 0.2645 | likely_benign | 0.2378 | benign | -0.061 | Destabilizing | 0.063 | N | 0.099 | neutral | None | None | None | None | N |
H/F | 0.2476 | likely_benign | 0.2241 | benign | 1.088 | Stabilizing | 0.134 | N | 0.293 | neutral | None | None | None | None | N |
H/G | 0.1754 | likely_benign | 0.1691 | benign | 0.09 | Stabilizing | 0.063 | N | 0.232 | neutral | None | None | None | None | N |
H/I | 0.2539 | likely_benign | 0.2223 | benign | 1.137 | Stabilizing | 0.134 | N | 0.254 | neutral | None | None | None | None | N |
H/K | 0.2802 | likely_benign | 0.231 | benign | 0.291 | Stabilizing | 0.063 | N | 0.234 | neutral | None | None | None | None | N |
H/L | 0.0998 | likely_benign | 0.0979 | benign | 1.137 | Stabilizing | None | N | 0.119 | neutral | N | 0.413372922 | None | None | N |
H/M | 0.3465 | ambiguous | 0.3134 | benign | 0.87 | Stabilizing | 0.012 | N | 0.081 | neutral | None | None | None | None | N |
H/N | 0.0834 | likely_benign | 0.0811 | benign | 0.291 | Stabilizing | 0.189 | N | 0.163 | neutral | N | 0.45431268 | None | None | N |
H/P | 0.1258 | likely_benign | 0.1127 | benign | 0.912 | Stabilizing | 0.534 | D | 0.354 | neutral | N | 0.455179472 | None | None | N |
H/Q | 0.1345 | likely_benign | 0.1194 | benign | 0.412 | Stabilizing | 0.003 | N | 0.039 | neutral | N | 0.380836429 | None | None | N |
H/R | 0.1335 | likely_benign | 0.1165 | benign | -0.376 | Destabilizing | 0.189 | N | 0.147 | neutral | N | 0.456219622 | None | None | N |
H/S | 0.1302 | likely_benign | 0.1226 | benign | 0.459 | Stabilizing | 0.004 | N | 0.082 | neutral | None | None | None | None | N |
H/T | 0.1897 | likely_benign | 0.1713 | benign | 0.587 | Stabilizing | 0.001 | N | 0.084 | neutral | None | None | None | None | N |
H/V | 0.1986 | likely_benign | 0.1726 | benign | 0.912 | Stabilizing | 0.063 | N | 0.216 | neutral | None | None | None | None | N |
H/W | 0.3303 | likely_benign | 0.3274 | benign | 1.062 | Stabilizing | 0.842 | D | 0.321 | neutral | None | None | None | None | N |
H/Y | 0.0909 | likely_benign | 0.089 | benign | 1.335 | Stabilizing | 0.001 | N | 0.065 | neutral | N | 0.415527792 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.