Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21816 | 65671;65672;65673 | chr2:178583736;178583735;178583734 | chr2:179448463;179448462;179448461 |
N2AB | 20175 | 60748;60749;60750 | chr2:178583736;178583735;178583734 | chr2:179448463;179448462;179448461 |
N2A | 19248 | 57967;57968;57969 | chr2:178583736;178583735;178583734 | chr2:179448463;179448462;179448461 |
N2B | 12751 | 38476;38477;38478 | chr2:178583736;178583735;178583734 | chr2:179448463;179448462;179448461 |
Novex-1 | 12876 | 38851;38852;38853 | chr2:178583736;178583735;178583734 | chr2:179448463;179448462;179448461 |
Novex-2 | 12943 | 39052;39053;39054 | chr2:178583736;178583735;178583734 | chr2:179448463;179448462;179448461 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.001 | N | 0.223 | 0.202 | 0.420447328233 | gnomAD-4.0.0 | 6.84874E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99954E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1295 | likely_benign | 0.1355 | benign | -0.181 | Destabilizing | 0.003 | N | 0.143 | neutral | None | None | None | None | N |
Q/C | 0.4686 | ambiguous | 0.447 | ambiguous | -0.038 | Destabilizing | 0.968 | D | 0.435 | neutral | None | None | None | None | N |
Q/D | 0.2734 | likely_benign | 0.2514 | benign | -0.034 | Destabilizing | 0.365 | N | 0.28 | neutral | None | None | None | None | N |
Q/E | 0.0741 | likely_benign | 0.0736 | benign | -0.033 | Destabilizing | 0.159 | N | 0.143 | neutral | N | 0.427587439 | None | None | N |
Q/F | 0.5417 | ambiguous | 0.5057 | ambiguous | -0.321 | Destabilizing | 0.582 | D | 0.559 | neutral | None | None | None | None | N |
Q/G | 0.1739 | likely_benign | 0.1735 | benign | -0.388 | Destabilizing | 0.365 | N | 0.259 | neutral | None | None | None | None | N |
Q/H | 0.1648 | likely_benign | 0.1533 | benign | -0.126 | Destabilizing | 0.958 | D | 0.368 | neutral | N | 0.487985323 | None | None | N |
Q/I | 0.2937 | likely_benign | 0.2805 | benign | 0.282 | Stabilizing | 0.223 | N | 0.411 | neutral | None | None | None | None | N |
Q/K | 0.0686 | likely_benign | 0.0651 | benign | -0.053 | Destabilizing | 0.002 | N | 0.078 | neutral | N | 0.415834437 | None | None | N |
Q/L | 0.0959 | likely_benign | 0.104 | benign | 0.282 | Stabilizing | 0.001 | N | 0.223 | neutral | N | 0.4798272 | None | None | N |
Q/M | 0.2666 | likely_benign | 0.2609 | benign | 0.211 | Stabilizing | 0.83 | D | 0.386 | neutral | None | None | None | None | N |
Q/N | 0.2116 | likely_benign | 0.192 | benign | -0.438 | Destabilizing | 0.365 | N | 0.282 | neutral | None | None | None | None | N |
Q/P | 0.2131 | likely_benign | 0.2402 | benign | 0.156 | Stabilizing | 0.68 | D | 0.433 | neutral | N | 0.506397726 | None | None | N |
Q/R | 0.0775 | likely_benign | 0.0758 | benign | 0.135 | Stabilizing | 0.001 | N | 0.117 | neutral | N | 0.458009133 | None | None | N |
Q/S | 0.1759 | likely_benign | 0.1695 | benign | -0.414 | Destabilizing | 0.111 | N | 0.145 | neutral | None | None | None | None | N |
Q/T | 0.1373 | likely_benign | 0.1314 | benign | -0.258 | Destabilizing | 0.003 | N | 0.153 | neutral | None | None | None | None | N |
Q/V | 0.1657 | likely_benign | 0.1658 | benign | 0.156 | Stabilizing | 0.111 | N | 0.24 | neutral | None | None | None | None | N |
Q/W | 0.427 | ambiguous | 0.4125 | ambiguous | -0.342 | Destabilizing | 0.991 | D | 0.436 | neutral | None | None | None | None | N |
Q/Y | 0.384 | ambiguous | 0.3572 | ambiguous | -0.072 | Destabilizing | 0.738 | D | 0.519 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.