Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21817 | 65674;65675;65676 | chr2:178583733;178583732;178583731 | chr2:179448460;179448459;179448458 |
N2AB | 20176 | 60751;60752;60753 | chr2:178583733;178583732;178583731 | chr2:179448460;179448459;179448458 |
N2A | 19249 | 57970;57971;57972 | chr2:178583733;178583732;178583731 | chr2:179448460;179448459;179448458 |
N2B | 12752 | 38479;38480;38481 | chr2:178583733;178583732;178583731 | chr2:179448460;179448459;179448458 |
Novex-1 | 12877 | 38854;38855;38856 | chr2:178583733;178583732;178583731 | chr2:179448460;179448459;179448458 |
Novex-2 | 12944 | 39055;39056;39057 | chr2:178583733;178583732;178583731 | chr2:179448460;179448459;179448458 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs751947173 | -0.091 | 0.999 | N | 0.617 | 0.438 | 0.32714864917 | gnomAD-2.1.1 | 1.08E-05 | None | None | None | None | N | None | 0 | 8.54E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs751947173 | -0.091 | 0.999 | N | 0.617 | 0.438 | 0.32714864917 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs751947173 | -0.091 | 0.999 | N | 0.617 | 0.438 | 0.32714864917 | gnomAD-4.0.0 | 2.48111E-06 | None | None | None | None | N | None | 0 | 3.34046E-05 | None | 0 | 0 | None | 0 | 0 | 1.69612E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2533 | likely_benign | 0.2246 | benign | 0.21 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | N | 0.495484512 | None | None | N |
E/C | 0.8413 | likely_pathogenic | 0.8087 | pathogenic | 0.122 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/D | 0.578 | likely_pathogenic | 0.5327 | ambiguous | -1.272 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.490078692 | None | None | N |
E/F | 0.9497 | likely_pathogenic | 0.936 | pathogenic | 0.958 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/G | 0.2978 | likely_benign | 0.2832 | benign | -0.262 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.467944836 | None | None | N |
E/H | 0.8697 | likely_pathogenic | 0.8363 | pathogenic | 0.581 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/I | 0.7422 | likely_pathogenic | 0.6782 | pathogenic | 1.519 | Stabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/K | 0.4774 | ambiguous | 0.425 | ambiguous | -0.275 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.466124397 | None | None | N |
E/L | 0.5917 | likely_pathogenic | 0.5275 | ambiguous | 1.519 | Stabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
E/M | 0.6004 | likely_pathogenic | 0.5575 | ambiguous | 1.863 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/N | 0.5813 | likely_pathogenic | 0.5345 | ambiguous | -0.92 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/P | 0.686 | likely_pathogenic | 0.6535 | pathogenic | 1.107 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/Q | 0.2821 | likely_benign | 0.2385 | benign | -0.589 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.499255536 | None | None | N |
E/R | 0.6004 | likely_pathogenic | 0.5566 | ambiguous | -0.185 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
E/S | 0.535 | ambiguous | 0.4863 | ambiguous | -1.305 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
E/T | 0.3474 | ambiguous | 0.3082 | benign | -0.885 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/V | 0.4445 | ambiguous | 0.3958 | ambiguous | 1.107 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.507797661 | None | None | N |
E/W | 0.9806 | likely_pathogenic | 0.9786 | pathogenic | 0.926 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/Y | 0.9017 | likely_pathogenic | 0.8828 | pathogenic | 1.19 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.