Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2182 | 6769;6770;6771 | chr2:178775167;178775166;178775165 | chr2:179639894;179639893;179639892 |
N2AB | 2182 | 6769;6770;6771 | chr2:178775167;178775166;178775165 | chr2:179639894;179639893;179639892 |
N2A | 2182 | 6769;6770;6771 | chr2:178775167;178775166;178775165 | chr2:179639894;179639893;179639892 |
N2B | 2136 | 6631;6632;6633 | chr2:178775167;178775166;178775165 | chr2:179639894;179639893;179639892 |
Novex-1 | 2136 | 6631;6632;6633 | chr2:178775167;178775166;178775165 | chr2:179639894;179639893;179639892 |
Novex-2 | 2136 | 6631;6632;6633 | chr2:178775167;178775166;178775165 | chr2:179639894;179639893;179639892 |
Novex-3 | 2182 | 6769;6770;6771 | chr2:178775167;178775166;178775165 | chr2:179639894;179639893;179639892 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 1.0 | D | 0.838 | 0.671 | 0.719514389011 | gnomAD-4.0.0 | 1.59085E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85683E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6198 | likely_pathogenic | 0.5998 | pathogenic | -0.285 | Destabilizing | 0.99 | D | 0.672 | neutral | D | 0.576731901 | None | None | N |
D/C | 0.9651 | likely_pathogenic | 0.9637 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
D/E | 0.6281 | likely_pathogenic | 0.6052 | pathogenic | -0.422 | Destabilizing | 0.998 | D | 0.459 | neutral | D | 0.601594974 | None | None | N |
D/F | 0.9762 | likely_pathogenic | 0.9764 | pathogenic | 0.137 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
D/G | 0.539 | ambiguous | 0.5256 | ambiguous | -0.573 | Destabilizing | 0.23 | N | 0.383 | neutral | D | 0.683424923 | None | None | N |
D/H | 0.8073 | likely_pathogenic | 0.8054 | pathogenic | 0.181 | Stabilizing | 1.0 | D | 0.789 | deleterious | D | 0.645656152 | None | None | N |
D/I | 0.9439 | likely_pathogenic | 0.9448 | pathogenic | 0.455 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
D/K | 0.9316 | likely_pathogenic | 0.9306 | pathogenic | -0.048 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
D/L | 0.9276 | likely_pathogenic | 0.9271 | pathogenic | 0.455 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
D/M | 0.9654 | likely_pathogenic | 0.9648 | pathogenic | 0.516 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
D/N | 0.188 | likely_benign | 0.179 | benign | -0.504 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.514848004 | None | None | N |
D/P | 0.8255 | likely_pathogenic | 0.7924 | pathogenic | 0.233 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
D/Q | 0.9059 | likely_pathogenic | 0.8987 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
D/R | 0.952 | likely_pathogenic | 0.9515 | pathogenic | 0.258 | Stabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
D/S | 0.3921 | ambiguous | 0.375 | ambiguous | -0.658 | Destabilizing | 0.992 | D | 0.603 | neutral | None | None | None | None | N |
D/T | 0.7196 | likely_pathogenic | 0.7067 | pathogenic | -0.424 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
D/V | 0.8443 | likely_pathogenic | 0.8455 | pathogenic | 0.233 | Stabilizing | 1.0 | D | 0.838 | deleterious | D | 0.597318984 | None | None | N |
D/W | 0.9939 | likely_pathogenic | 0.9942 | pathogenic | 0.323 | Stabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
D/Y | 0.8061 | likely_pathogenic | 0.8161 | pathogenic | 0.38 | Stabilizing | 1.0 | D | 0.832 | deleterious | D | 0.72254606 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.