Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21833 | 65722;65723;65724 | chr2:178583685;178583684;178583683 | chr2:179448412;179448411;179448410 |
N2AB | 20192 | 60799;60800;60801 | chr2:178583685;178583684;178583683 | chr2:179448412;179448411;179448410 |
N2A | 19265 | 58018;58019;58020 | chr2:178583685;178583684;178583683 | chr2:179448412;179448411;179448410 |
N2B | 12768 | 38527;38528;38529 | chr2:178583685;178583684;178583683 | chr2:179448412;179448411;179448410 |
Novex-1 | 12893 | 38902;38903;38904 | chr2:178583685;178583684;178583683 | chr2:179448412;179448411;179448410 |
Novex-2 | 12960 | 39103;39104;39105 | chr2:178583685;178583684;178583683 | chr2:179448412;179448411;179448410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.967 | N | 0.625 | 0.405 | 0.674717478158 | gnomAD-4.0.0 | 1.59485E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79392E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9895 | likely_pathogenic | 0.9898 | pathogenic | -1.894 | Destabilizing | 0.845 | D | 0.638 | neutral | None | None | None | None | N |
R/C | 0.6847 | likely_pathogenic | 0.6956 | pathogenic | -1.811 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
R/D | 0.9988 | likely_pathogenic | 0.9988 | pathogenic | -0.825 | Destabilizing | 0.975 | D | 0.691 | prob.neutral | None | None | None | None | N |
R/E | 0.9802 | likely_pathogenic | 0.98 | pathogenic | -0.605 | Destabilizing | 0.845 | D | 0.642 | neutral | None | None | None | None | N |
R/F | 0.9874 | likely_pathogenic | 0.9879 | pathogenic | -1.105 | Destabilizing | 0.996 | D | 0.806 | deleterious | None | None | None | None | N |
R/G | 0.9892 | likely_pathogenic | 0.9873 | pathogenic | -2.256 | Highly Destabilizing | 0.892 | D | 0.669 | neutral | D | 0.543121604 | None | None | N |
R/H | 0.423 | ambiguous | 0.4413 | ambiguous | -2.027 | Highly Destabilizing | 0.987 | D | 0.637 | neutral | None | None | None | None | N |
R/I | 0.9707 | likely_pathogenic | 0.9714 | pathogenic | -0.846 | Destabilizing | 0.983 | D | 0.809 | deleterious | N | 0.506913094 | None | None | N |
R/K | 0.6684 | likely_pathogenic | 0.6083 | pathogenic | -1.261 | Destabilizing | 0.63 | D | 0.656 | neutral | N | 0.494743413 | None | None | N |
R/L | 0.9391 | likely_pathogenic | 0.9418 | pathogenic | -0.846 | Destabilizing | 0.916 | D | 0.669 | neutral | None | None | None | None | N |
R/M | 0.9785 | likely_pathogenic | 0.9774 | pathogenic | -1.349 | Destabilizing | 0.997 | D | 0.687 | prob.neutral | None | None | None | None | N |
R/N | 0.9937 | likely_pathogenic | 0.9942 | pathogenic | -1.244 | Destabilizing | 0.975 | D | 0.586 | neutral | None | None | None | None | N |
R/P | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -1.183 | Destabilizing | 0.987 | D | 0.753 | deleterious | None | None | None | None | N |
R/Q | 0.5641 | likely_pathogenic | 0.5594 | ambiguous | -1.134 | Destabilizing | 0.253 | N | 0.429 | neutral | None | None | None | None | N |
R/S | 0.9911 | likely_pathogenic | 0.9918 | pathogenic | -2.177 | Highly Destabilizing | 0.805 | D | 0.619 | neutral | N | 0.516949045 | None | None | N |
R/T | 0.9859 | likely_pathogenic | 0.987 | pathogenic | -1.737 | Destabilizing | 0.967 | D | 0.625 | neutral | N | 0.492198972 | None | None | N |
R/V | 0.9727 | likely_pathogenic | 0.9744 | pathogenic | -1.183 | Destabilizing | 0.975 | D | 0.762 | deleterious | None | None | None | None | N |
R/W | 0.801 | likely_pathogenic | 0.8421 | pathogenic | -0.587 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
R/Y | 0.9538 | likely_pathogenic | 0.961 | pathogenic | -0.443 | Destabilizing | 0.987 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.