Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21836 | 65731;65732;65733 | chr2:178583676;178583675;178583674 | chr2:179448403;179448402;179448401 |
N2AB | 20195 | 60808;60809;60810 | chr2:178583676;178583675;178583674 | chr2:179448403;179448402;179448401 |
N2A | 19268 | 58027;58028;58029 | chr2:178583676;178583675;178583674 | chr2:179448403;179448402;179448401 |
N2B | 12771 | 38536;38537;38538 | chr2:178583676;178583675;178583674 | chr2:179448403;179448402;179448401 |
Novex-1 | 12896 | 38911;38912;38913 | chr2:178583676;178583675;178583674 | chr2:179448403;179448402;179448401 |
Novex-2 | 12963 | 39112;39113;39114 | chr2:178583676;178583675;178583674 | chr2:179448403;179448402;179448401 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.955 | D | 0.667 | 0.59 | 0.712790429676 | gnomAD-4.0.0 | 6.84941E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00012E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7578 | likely_pathogenic | 0.7135 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
A/D | 0.9982 | likely_pathogenic | 0.9979 | pathogenic | -2.718 | Highly Destabilizing | 0.993 | D | 0.827 | deleterious | D | 0.560875416 | None | None | N |
A/E | 0.9957 | likely_pathogenic | 0.9951 | pathogenic | -2.462 | Highly Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | N |
A/F | 0.9744 | likely_pathogenic | 0.9731 | pathogenic | -0.765 | Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
A/G | 0.6308 | likely_pathogenic | 0.5632 | ambiguous | -2.1 | Highly Destabilizing | 0.977 | D | 0.653 | neutral | D | 0.536730773 | None | None | N |
A/H | 0.9957 | likely_pathogenic | 0.9956 | pathogenic | -2.224 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
A/I | 0.9231 | likely_pathogenic | 0.8673 | pathogenic | -0.229 | Destabilizing | 0.995 | D | 0.821 | deleterious | None | None | None | None | N |
A/K | 0.9985 | likely_pathogenic | 0.9985 | pathogenic | -1.31 | Destabilizing | 0.995 | D | 0.819 | deleterious | None | None | None | None | N |
A/L | 0.8284 | likely_pathogenic | 0.7745 | pathogenic | -0.229 | Destabilizing | 0.966 | D | 0.759 | deleterious | None | None | None | None | N |
A/M | 0.9448 | likely_pathogenic | 0.9071 | pathogenic | -0.725 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
A/N | 0.9926 | likely_pathogenic | 0.9904 | pathogenic | -1.784 | Destabilizing | 0.995 | D | 0.829 | deleterious | None | None | None | None | N |
A/P | 0.9754 | likely_pathogenic | 0.98 | pathogenic | -0.651 | Destabilizing | 0.997 | D | 0.827 | deleterious | D | 0.549354526 | None | None | N |
A/Q | 0.9862 | likely_pathogenic | 0.9854 | pathogenic | -1.485 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
A/R | 0.9905 | likely_pathogenic | 0.992 | pathogenic | -1.487 | Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
A/S | 0.4084 | ambiguous | 0.3377 | benign | -2.18 | Highly Destabilizing | 0.955 | D | 0.631 | neutral | D | 0.525486145 | None | None | N |
A/T | 0.6694 | likely_pathogenic | 0.4992 | ambiguous | -1.797 | Destabilizing | 0.568 | D | 0.405 | neutral | N | 0.513369371 | None | None | N |
A/V | 0.7065 | likely_pathogenic | 0.5699 | pathogenic | -0.651 | Destabilizing | 0.955 | D | 0.667 | neutral | D | 0.540489755 | None | None | N |
A/W | 0.9981 | likely_pathogenic | 0.9982 | pathogenic | -1.452 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
A/Y | 0.9932 | likely_pathogenic | 0.9936 | pathogenic | -1.03 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.