Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21837 | 65734;65735;65736 | chr2:178583673;178583672;178583671 | chr2:179448400;179448399;179448398 |
N2AB | 20196 | 60811;60812;60813 | chr2:178583673;178583672;178583671 | chr2:179448400;179448399;179448398 |
N2A | 19269 | 58030;58031;58032 | chr2:178583673;178583672;178583671 | chr2:179448400;179448399;179448398 |
N2B | 12772 | 38539;38540;38541 | chr2:178583673;178583672;178583671 | chr2:179448400;179448399;179448398 |
Novex-1 | 12897 | 38914;38915;38916 | chr2:178583673;178583672;178583671 | chr2:179448400;179448399;179448398 |
Novex-2 | 12964 | 39115;39116;39117 | chr2:178583673;178583672;178583671 | chr2:179448400;179448399;179448398 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/W | rs2048289282 | None | 0.828 | N | 0.589 | 0.369 | 0.446211707333 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/W | rs2048289282 | None | 0.828 | N | 0.589 | 0.369 | 0.446211707333 | gnomAD-4.0.0 | 6.57428E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47093E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7069 | likely_pathogenic | 0.6492 | pathogenic | -1.818 | Destabilizing | 0.007 | N | 0.231 | neutral | None | None | None | None | I |
R/C | 0.3084 | likely_benign | 0.2734 | benign | -1.798 | Destabilizing | 0.864 | D | 0.577 | neutral | None | None | None | None | I |
R/D | 0.9636 | likely_pathogenic | 0.9391 | pathogenic | -0.494 | Destabilizing | 0.031 | N | 0.485 | neutral | None | None | None | None | I |
R/E | 0.6768 | likely_pathogenic | 0.5687 | pathogenic | -0.298 | Destabilizing | 0.007 | N | 0.207 | neutral | None | None | None | None | I |
R/F | 0.7887 | likely_pathogenic | 0.7578 | pathogenic | -1.298 | Destabilizing | 0.628 | D | 0.594 | neutral | None | None | None | None | I |
R/G | 0.7114 | likely_pathogenic | 0.6315 | pathogenic | -2.175 | Highly Destabilizing | 0.024 | N | 0.429 | neutral | N | 0.48479309 | None | None | I |
R/H | 0.2493 | likely_benign | 0.221 | benign | -2.064 | Highly Destabilizing | 0.356 | N | 0.507 | neutral | None | None | None | None | I |
R/I | 0.426 | ambiguous | 0.379 | ambiguous | -0.802 | Destabilizing | 0.136 | N | 0.61 | neutral | None | None | None | None | I |
R/K | 0.0723 | likely_benign | 0.0655 | benign | -1.347 | Destabilizing | None | N | 0.179 | neutral | N | 0.36369625 | None | None | I |
R/L | 0.4361 | ambiguous | 0.406 | ambiguous | -0.802 | Destabilizing | 0.031 | N | 0.429 | neutral | None | None | None | None | I |
R/M | 0.4447 | ambiguous | 0.3865 | ambiguous | -1.201 | Destabilizing | 0.56 | D | 0.552 | neutral | N | 0.449429722 | None | None | I |
R/N | 0.8833 | likely_pathogenic | 0.8322 | pathogenic | -1.092 | Destabilizing | 0.031 | N | 0.419 | neutral | None | None | None | None | I |
R/P | 0.964 | likely_pathogenic | 0.9544 | pathogenic | -1.126 | Destabilizing | 0.136 | N | 0.555 | neutral | None | None | None | None | I |
R/Q | 0.1763 | likely_benign | 0.1503 | benign | -1.131 | Destabilizing | 0.016 | N | 0.419 | neutral | None | None | None | None | I |
R/S | 0.8253 | likely_pathogenic | 0.7617 | pathogenic | -2.137 | Highly Destabilizing | 0.012 | N | 0.317 | neutral | N | 0.457875847 | None | None | I |
R/T | 0.5241 | ambiguous | 0.4349 | ambiguous | -1.72 | Destabilizing | 0.024 | N | 0.419 | neutral | N | 0.424840709 | None | None | I |
R/V | 0.4546 | ambiguous | 0.4111 | ambiguous | -1.126 | Destabilizing | 0.072 | N | 0.543 | neutral | None | None | None | None | I |
R/W | 0.4102 | ambiguous | 0.3697 | ambiguous | -0.731 | Destabilizing | 0.828 | D | 0.589 | neutral | N | 0.495740802 | None | None | I |
R/Y | 0.6642 | likely_pathogenic | 0.6178 | pathogenic | -0.559 | Destabilizing | 0.356 | N | 0.63 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.