Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21838 | 65737;65738;65739 | chr2:178583670;178583669;178583668 | chr2:179448397;179448396;179448395 |
N2AB | 20197 | 60814;60815;60816 | chr2:178583670;178583669;178583668 | chr2:179448397;179448396;179448395 |
N2A | 19270 | 58033;58034;58035 | chr2:178583670;178583669;178583668 | chr2:179448397;179448396;179448395 |
N2B | 12773 | 38542;38543;38544 | chr2:178583670;178583669;178583668 | chr2:179448397;179448396;179448395 |
Novex-1 | 12898 | 38917;38918;38919 | chr2:178583670;178583669;178583668 | chr2:179448397;179448396;179448395 |
Novex-2 | 12965 | 39118;39119;39120 | chr2:178583670;178583669;178583668 | chr2:179448397;179448396;179448395 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1458673199 | -1.385 | 1.0 | N | 0.827 | 0.379 | 0.31411915649 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.67448E-04 |
T/N | rs1458673199 | -1.385 | 1.0 | N | 0.827 | 0.379 | 0.31411915649 | gnomAD-4.0.0 | 1.595E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03232E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.6945 | likely_pathogenic | 0.5939 | pathogenic | -1.026 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.46772148 | None | None | N |
T/C | 0.8634 | likely_pathogenic | 0.8066 | pathogenic | -0.996 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
T/D | 0.9175 | likely_pathogenic | 0.888 | pathogenic | -1.555 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
T/E | 0.9694 | likely_pathogenic | 0.9612 | pathogenic | -1.464 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
T/F | 0.9826 | likely_pathogenic | 0.9693 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
T/G | 0.8032 | likely_pathogenic | 0.7343 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
T/H | 0.9111 | likely_pathogenic | 0.8803 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
T/I | 0.968 | likely_pathogenic | 0.9503 | pathogenic | -0.245 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.468481949 | None | None | N |
T/K | 0.956 | likely_pathogenic | 0.9429 | pathogenic | -0.875 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
T/L | 0.7878 | likely_pathogenic | 0.7145 | pathogenic | -0.245 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
T/M | 0.6617 | likely_pathogenic | 0.5616 | ambiguous | -0.079 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
T/N | 0.2248 | likely_benign | 0.2028 | benign | -1.235 | Destabilizing | 1.0 | D | 0.827 | deleterious | N | 0.326588151 | None | None | N |
T/P | 0.8896 | likely_pathogenic | 0.8514 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.854 | deleterious | N | 0.46797497 | None | None | N |
T/Q | 0.9471 | likely_pathogenic | 0.9287 | pathogenic | -1.339 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
T/R | 0.9473 | likely_pathogenic | 0.9309 | pathogenic | -0.717 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
T/S | 0.4026 | ambiguous | 0.3051 | benign | -1.406 | Destabilizing | 0.999 | D | 0.632 | neutral | N | 0.477112182 | None | None | N |
T/V | 0.8834 | likely_pathogenic | 0.8467 | pathogenic | -0.475 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
T/W | 0.9942 | likely_pathogenic | 0.9908 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
T/Y | 0.9715 | likely_pathogenic | 0.953 | pathogenic | -0.606 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.