Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21846 | 65761;65762;65763 | chr2:178583646;178583645;178583644 | chr2:179448373;179448372;179448371 |
N2AB | 20205 | 60838;60839;60840 | chr2:178583646;178583645;178583644 | chr2:179448373;179448372;179448371 |
N2A | 19278 | 58057;58058;58059 | chr2:178583646;178583645;178583644 | chr2:179448373;179448372;179448371 |
N2B | 12781 | 38566;38567;38568 | chr2:178583646;178583645;178583644 | chr2:179448373;179448372;179448371 |
Novex-1 | 12906 | 38941;38942;38943 | chr2:178583646;178583645;178583644 | chr2:179448373;179448372;179448371 |
Novex-2 | 12973 | 39142;39143;39144 | chr2:178583646;178583645;178583644 | chr2:179448373;179448372;179448371 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | D | 0.859 | 0.704 | 0.667980572847 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4758 | ambiguous | 0.4491 | ambiguous | -0.824 | Destabilizing | 0.997 | D | 0.831 | deleterious | N | 0.491473817 | None | None | N |
S/C | 0.5239 | ambiguous | 0.4646 | ambiguous | -0.805 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.551915875 | None | None | N |
S/D | 0.9925 | likely_pathogenic | 0.9888 | pathogenic | -1.544 | Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
S/E | 0.9932 | likely_pathogenic | 0.9922 | pathogenic | -1.403 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
S/F | 0.9948 | likely_pathogenic | 0.9947 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.902 | deleterious | D | 0.551915875 | None | None | N |
S/G | 0.4829 | ambiguous | 0.3916 | ambiguous | -1.19 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
S/H | 0.9905 | likely_pathogenic | 0.9895 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
S/I | 0.9845 | likely_pathogenic | 0.9847 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
S/K | 0.9987 | likely_pathogenic | 0.9986 | pathogenic | -0.918 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
S/L | 0.9334 | likely_pathogenic | 0.9313 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
S/M | 0.971 | likely_pathogenic | 0.9648 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
S/N | 0.9699 | likely_pathogenic | 0.9569 | pathogenic | -1.367 | Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
S/P | 0.9893 | likely_pathogenic | 0.9905 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.551662385 | None | None | N |
S/Q | 0.9894 | likely_pathogenic | 0.9893 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
S/R | 0.9953 | likely_pathogenic | 0.9954 | pathogenic | -1.085 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
S/T | 0.6482 | likely_pathogenic | 0.5817 | pathogenic | -1.08 | Destabilizing | 0.999 | D | 0.875 | deleterious | N | 0.512412001 | None | None | N |
S/V | 0.9579 | likely_pathogenic | 0.9529 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
S/W | 0.9928 | likely_pathogenic | 0.9938 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
S/Y | 0.9916 | likely_pathogenic | 0.9923 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.551662385 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.