Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 21849 | 65770;65771;65772 | chr2:178583637;178583636;178583635 | chr2:179448364;179448363;179448362 |
N2AB | 20208 | 60847;60848;60849 | chr2:178583637;178583636;178583635 | chr2:179448364;179448363;179448362 |
N2A | 19281 | 58066;58067;58068 | chr2:178583637;178583636;178583635 | chr2:179448364;179448363;179448362 |
N2B | 12784 | 38575;38576;38577 | chr2:178583637;178583636;178583635 | chr2:179448364;179448363;179448362 |
Novex-1 | 12909 | 38950;38951;38952 | chr2:178583637;178583636;178583635 | chr2:179448364;179448363;179448362 |
Novex-2 | 12976 | 39151;39152;39153 | chr2:178583637;178583636;178583635 | chr2:179448364;179448363;179448362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1060500465 | None | 0.999 | N | 0.886 | 0.396 | 0.58951732002 | gnomAD-4.0.0 | 3.20569E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.76073E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2796 | likely_benign | 0.2192 | benign | -0.622 | Destabilizing | 0.994 | D | 0.685 | prob.delet. | N | 0.480871304 | None | None | N |
S/C | 0.3384 | likely_benign | 0.2672 | benign | -0.518 | Destabilizing | 1.0 | D | 0.723 | deleterious | N | 0.50306739 | None | None | N |
S/D | 0.9797 | likely_pathogenic | 0.9725 | pathogenic | -1.342 | Destabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | N |
S/E | 0.9904 | likely_pathogenic | 0.9864 | pathogenic | -1.185 | Destabilizing | 0.998 | D | 0.564 | neutral | None | None | None | None | N |
S/F | 0.9735 | likely_pathogenic | 0.9507 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.886 | deleterious | N | 0.508636797 | None | None | N |
S/G | 0.3386 | likely_benign | 0.2786 | benign | -1.01 | Destabilizing | 0.998 | D | 0.656 | prob.neutral | None | None | None | None | N |
S/H | 0.9824 | likely_pathogenic | 0.9776 | pathogenic | -1.496 | Destabilizing | 1.0 | D | 0.732 | deleterious | None | None | None | None | N |
S/I | 0.8781 | likely_pathogenic | 0.7859 | pathogenic | 0.35 | Stabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
S/K | 0.9982 | likely_pathogenic | 0.9973 | pathogenic | -0.632 | Destabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | N |
S/L | 0.6279 | likely_pathogenic | 0.5099 | ambiguous | 0.35 | Stabilizing | 0.999 | D | 0.723 | deleterious | None | None | None | None | N |
S/M | 0.7911 | likely_pathogenic | 0.6809 | pathogenic | 0.288 | Stabilizing | 1.0 | D | 0.727 | deleterious | None | None | None | None | N |
S/N | 0.9027 | likely_pathogenic | 0.8688 | pathogenic | -1.159 | Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
S/P | 0.9819 | likely_pathogenic | 0.9756 | pathogenic | 0.062 | Stabilizing | 0.999 | D | 0.745 | deleterious | N | 0.49804096 | None | None | N |
S/Q | 0.9856 | likely_pathogenic | 0.9804 | pathogenic | -0.932 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
S/R | 0.9957 | likely_pathogenic | 0.994 | pathogenic | -0.954 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
S/T | 0.1249 | likely_benign | 0.0958 | benign | -0.82 | Destabilizing | 0.997 | D | 0.669 | prob.neutral | N | 0.467817908 | None | None | N |
S/V | 0.7531 | likely_pathogenic | 0.6222 | pathogenic | 0.062 | Stabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
S/W | 0.9824 | likely_pathogenic | 0.9732 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
S/Y | 0.9734 | likely_pathogenic | 0.9587 | pathogenic | -0.23 | Destabilizing | 0.999 | D | 0.894 | deleterious | N | 0.520246592 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.